| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1816 |
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| Symbol | |
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| ID | 8252919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2113820 |
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| End bp | 2116222 |
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| Gene Length | 2403 bp |
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| Protein Length | 800 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644935467 |
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| Product | glycoside hydrolase family 2 sugar binding |
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| Protein accession | YP_003092087 |
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| Protein GI | 255531715 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0827193 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000000316153 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAAACTA CTGTGTGCAG CATTTTTGCT GTTGTGCTGT TTACTTTTTT TAACCTTTCG
GTGAAAGGAC AATATAAAAT GCAACCTGTA AGCATCCAAA CTCGTTGGGC CGTTCAGGTT
AGCCCTGTTA ACGCGCTAAA AGAATATCCA CGCCCGCAAA TGGTACGTTC GGGATGGACA
AATTTAAACG GCCTATGGGA TTATGCCATT ACGGCTAAGG ATGCCGCGCA GCCTGCTGTT
TTTGATGGCA AGATCCTGGT GCCTTATCCT TTGGAATCGG CCCTTTCGGG TGTGAAGAAA
GCGCTGTTGC CCTCGCAAAA CTTATGGTAC AAACGCTCAT TTGCTCGTCC CGATATTAAA
TCCGGAGAAA AAGTAATGCT GAATTTCGGC GCGGTTGATT ACCAGTGCTG GGTGTATGTA
AACGGGACTT TGCTGGGCGA ACATGAAGGC GGTTATACCG AGTTTAGTTT TGATATTACA
GCTGCCCTGA AAGCGGGCAA TAATGAGATT GTAGTAAAGG TTTTTGACCC GACGGGTGAG
GGTATTGGCC CGCATGGCAA GCAGGTGCTG AAGCCGGAAA ATATCTATTA TACCCCAAGT
AGCGGGATAT GGCAAACGGT ATGGATGGAG GTGGTACCAG AGGTTTCGAT AGCAGCACTG
GTGATGACAC CGGATGTGGA TAAGGGCGTG TTGAATTTGG AGGTGAAGGG AAAGGGTAAG
CCCGAAATTG TTGTTTATGA TCCAGTGTCT AAACAAGAGA TCTCTCGTCG CTTTGCTTCC
CTCGAGATGA CGAACGATGG GGCTAAGGGT ACAATAAAAA TACCTAATGC AAAGTTATGG
AGCCCAGGTA ACCCGCATTT GTATGACATT ACGGTTAAGC TAGGTGATGA CGAAGTTAAA
AGCTATTTTG GGATGCGGAA GATTAGTGTG GACAAGGACG CTGCAGGTGT GGACAGGATA
TTTTTGAACA ACAGGCCCTA TTTTAACCTC GGTACTTTAG ACCAGGGCTT TTGGCCGGAT
GGCCTGTACA CTGCCCCTAC GGATGAGGCC CTGGCCTTTG ACATCAGGGC CATAAAAGCT
ATGGGTTTCA ATACCATCCG CAAGCACATT AAGGTAGAAC CTGCCCGCTG GTATTACCAT
GCCGATAAAA TAGGCATGCT GGTATGGCAA GATATGGTAA ACCCCAACCA GGGATTGCCG
GAAGGTGCCA AAGCTGCTTT TGAAAAAGGG GCCAAAGAGA CCATGGCGCA ACTGCACAAT
TACCCCTCTA TTACCACATG GGTATTGTTT AACGAGGCCT GGGGGCAATA TGACCAGGAA
CGCCTGACCA AATGGATGAA AGGGAACGAC CCATCGAGGA TAGTGAACGG CCACTCAGGT
GAGCTGTTGT ATGTAAACGA AAAGCTGCGT GCAGCCAGGG AAAACCCTTA TGTAGCGGCA
GATATGACCG ATGTGCATGC TTATCCCGAC CCGATGAATG CTTTGAAACA GCCCGGCAAG
GCACAGGTGC TAGGTGAGTT TGGCGGCATC GGGGTGTTTA TCCCTGATCA TCAGTGGTTA
AGTGGCTCGG CATGGGGTTA CATTCAGGAA AAGCCTGCTG CACTGGCGGC CAAGTATAAG
ATCATGAACC AGCATCTGCA ATTGCTGGAA AAAGAAGGTC TGTCTGCCTC CATCTACACC
CAGCCATTTG ATGTGGAGGG AGAGCAGAAC GGGCTGATGA CCTATGACCG GGAAGTGGTA
AAGGTCCCTT TTGCGGAACT GAGGGAGATC CATAAGGGCC TGAATCCGGA GGTTGCCGCG
CCATCCTGGC TGGCCATGAC AAAGTTGGTT TCGGCTAAAG ATGCAGATCT GACGGAGCCG
GCTTTGGTTT ATGCCAAAGC AATTGAGGAG TATTTAAAAG GCAAAAAGGA TCCTGCCTTT
CTGAAAAAGC TGGTGATGAT GGCTGGGCAA ACGGGCGATA AGGCCGGTAC GGCCAGGTTT
GGGGCAGCAT ATATGAATAC TTTGAAAGAG CCTTATTCGG CTGAGGACAT CGCCTTTATG
GAAAGCATCA CCAAAAAGGT GACAGATAAG GGCTTTGCCA TTTTGCTGAA ACAGGCCGGT
ACAGACCGTA CTGCATATGT AAAAGCGATG AATGTGATTT ATGCGGATGT GATTGCTGGC
TTTGTGCCCA AAGCGGACAG CAAACCGGAT TGGAATGCGG TAGAAGCTGC GATAAAGCCT
TATGGTTTGC CTGGAGAGGA AATGTTTTTG AGGGCCAGGA CCATCCATTT GTACAACCAG
AAAGATTGGG CTGCTTATGT TCCGGTAGCT TCGGCTTACC TGGAAAAGTT TGGCAGCGGC
ATCAGTGAAA GTGACAGACA GGCCTTTCAG GCGGCGATTG ATCAAAACCG GGGTAAAGAA
TAA
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| Protein sequence | MKTTVCSIFA VVLFTFFNLS VKGQYKMQPV SIQTRWAVQV SPVNALKEYP RPQMVRSGWT
NLNGLWDYAI TAKDAAQPAV FDGKILVPYP LESALSGVKK ALLPSQNLWY KRSFARPDIK
SGEKVMLNFG AVDYQCWVYV NGTLLGEHEG GYTEFSFDIT AALKAGNNEI VVKVFDPTGE
GIGPHGKQVL KPENIYYTPS SGIWQTVWME VVPEVSIAAL VMTPDVDKGV LNLEVKGKGK
PEIVVYDPVS KQEISRRFAS LEMTNDGAKG TIKIPNAKLW SPGNPHLYDI TVKLGDDEVK
SYFGMRKISV DKDAAGVDRI FLNNRPYFNL GTLDQGFWPD GLYTAPTDEA LAFDIRAIKA
MGFNTIRKHI KVEPARWYYH ADKIGMLVWQ DMVNPNQGLP EGAKAAFEKG AKETMAQLHN
YPSITTWVLF NEAWGQYDQE RLTKWMKGND PSRIVNGHSG ELLYVNEKLR AARENPYVAA
DMTDVHAYPD PMNALKQPGK AQVLGEFGGI GVFIPDHQWL SGSAWGYIQE KPAALAAKYK
IMNQHLQLLE KEGLSASIYT QPFDVEGEQN GLMTYDREVV KVPFAELREI HKGLNPEVAA
PSWLAMTKLV SAKDADLTEP ALVYAKAIEE YLKGKKDPAF LKKLVMMAGQ TGDKAGTARF
GAAYMNTLKE PYSAEDIAFM ESITKKVTDK GFAILLKQAG TDRTAYVKAM NVIYADVIAG
FVPKADSKPD WNAVEAAIKP YGLPGEEMFL RARTIHLYNQ KDWAAYVPVA SAYLEKFGSG
ISESDRQAFQ AAIDQNRGKE
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