| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1810 |
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| Symbol | |
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| ID | 8252913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2108001 |
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| End bp | 2110490 |
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| Gene Length | 2490 bp |
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| Protein Length | 829 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644935461 |
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| Product | PAS sensor protein |
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| Protein accession | YP_003092081 |
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| Protein GI | 255531709 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000000473758 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTGATC CGATAAATGT ACTGAGTGCT GAACAATTAA ACTATATCCT CTCATTCTCC
CCCACGGCTA CTGCTATTCA CGTAGGTGAA CAAGCACAAA TTCAATTTGC CAATGATGCT
ATGCTTGCCA TTTGGGGCAG AGGTAAAGAA GTGTTGGGAA AAACTTTGGT CCAGGCGATG
CCTGAACTGG AAGGCCAGCC ATTTGTAGAG ATGTTTGCAA GAGTCTGGCA TGAGGGCATC
ACCCTTTCAG GATCGGACAC TCCGGCCGAA ATCCTGACCA ATGGAGAACT GAATACTTTT
TATTTTGATT TTGAATACCG GGCCATTAAG AATGAGGTAG GAAGCGTAAT AGGCATATTG
CACACGGCTA CAGATGTGAC AGAACGATAC CTCAACAGAC GTGACCTCGC GATGGCGATA
CAAAATAAGG AACTGCTGGA ACGTGAGCAA ACATTGAATG AGGAATTGGC TGCATCAAAT
GAGGAGCTAA GTGCCATTAA TGAAGAGCTG CTGACAAGCC GGGAAGAACT TGCCAGAATG
AATGCGGAAC TGGAATCGAT GGTGCAAGAG CGGGTAAAAG CATTTGCAGA AAGTGAAGAG
CGTTTCCGGT CTATGGCCGA CAACACCGAT GTATTGGTTG CCGTAGCAGA TGAAAGCGGA
AGGCGGTTTT ACTTCAATAA AGCCTGGTCG AAGCTTACCG GAAGAACAGC CGATAAGCTT
ATGGTTTCGG GATGGCATGA TCTGATCCAT GAGCTGGACA GGCAGCGGTT CCAGGATGTG
CATGGAGCCG CGTTTGCAAA ACGGGCATCC TACTCAGATG AGATAAGAGT GCTCGGACAA
GATGGATCCT ACCATTGGCT GGTAAAAAAA GGAACACCCA GATTTCTATC TGATGGAACC
TTTGCCGGAT ATATCAGTTC CTGCATTGAT ATTACCCAAA GAAAACTGGA CGAGCAGAAA
TTGCAGTCCC TCAATGAAAA ACTGGCAGCG TCTAATGAAG AATTTGCTGC GTTGAACGAA
GAGCTGGCTA CGACGAACGA AGAGCTTGCT GCTTCTTATG ATGAGCTGGT GCTCAGTGAA
GCGCGTTTCA GGAATCTGAT CAAACAAGCT CCTGTAGCGA TCTGCGTCAT TAGGGCTAAT
GATCTGATGA TCACCGAAGT CAACACCGGG TATTTGGAAC TGGTCGGCAA GCAGTTGGCG
CAGTTGGAAA ACCATACAAT TTGGGACGCA GTGGCAGAGG CTGCCGAAGT CTATGCGCCG
CTTATGCAGC AGGTGATCTC TACCGGAATC CCTTTTCACG CCAGAGAGCA TGAGCTAATA
CTGGTACGTA ATGGCATTGA TGAAACAGTA TTCGTTGATT TTGTCTATGA ACCGGTGACT
GATCTGCAGG GACAAGTCAC TTCAATTATG GTGGTCGGTA ATGAGGTAAC CGATAAAGTA
TTGGCCAGGA GGCGCATAGA AGATGCGGAG GAGCGCAGTC GCCTTGCGAT AGAAGCGGCT
GAAATTGGCA CCTACGAATT CAGCTATATC GATGGATCCC TTACCAGCTC AGAGCGGTTT
AATGAGATCT TCGGGCTTCA GGAACCGGTA AGCAGAGAAC GGGTACTGGC AACCTATCAT
CCCTTAGATG AGGGTGTGAG TGAACAGGCG CACGCCATTG CCAAGCAGAC CGGACGCCTG
TTTTACGAGA CACGTCTGTT GCTAACCGGT GGTGCACTCA AGTGGATACG TGTGCAGGGT
AACGTTCATT ACAGCAGCGA GGGAGTGCTA AAGAAGCTGT TAGGCACCGT GATCGACATT
ACTGAGTTCA AAAGATTGCA GCAGCAAAAG GATGATTTTA TTTCTATTGC CAGCCACGAA
CTAAAAACCC CGATTACCAG TCTTAAAGCA TCCTTACAAC TATTAGAAAG AATGAAGGCA
AATCCTACGC CAATGCTATC CCGGCTGATA GAACAGTCCA ACAGAAGCAT GGAGAAAGTT
TCTGTACTGG TCGATGATTT ATTGAATGTA ACCAGGATAA ACGAAGGTCA GATGGCGCTG
GTAAAAAAGA AATTTAGTTT TAATAAGATG ATAGACGAAT GCTGCTCACA GGTTAGGCAA
CTGGGAACAC ATGAGCTTGT TGTGCAAGGC GTAAAGGAAC TGCAGATTGT GGCGGATGAG
AACCGCATCG AGCAGGTGAT TTCAAACTTC GTAACCAATG CAGTAAAGTA TGCCACGGCC
AGCAGGGAGA TTTTTCTTAA AATTGAAGAT CTTGATCAGC AGGTTAAAAT ATCGGTAAGA
GACACCGGCC CCGGCATTCC AGCTAATAAA CTGCCACATT TATTTGATCG GTATTTCCGG
GCCGACCAAA CGGGTGCCCA GGTCTCCGGT TTGGGTTTGG GGCTCTATAT CTGCGCTGAT
ATCATCAAGC GGCATGGTGG AGAGATCGGG GTCGACAGCA TTGAAGGTGT TGGTTCAACA
TTTTGGTTTA CTATTCCTAT TGGAGGATAG
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| Protein sequence | MSDPINVLSA EQLNYILSFS PTATAIHVGE QAQIQFANDA MLAIWGRGKE VLGKTLVQAM
PELEGQPFVE MFARVWHEGI TLSGSDTPAE ILTNGELNTF YFDFEYRAIK NEVGSVIGIL
HTATDVTERY LNRRDLAMAI QNKELLEREQ TLNEELAASN EELSAINEEL LTSREELARM
NAELESMVQE RVKAFAESEE RFRSMADNTD VLVAVADESG RRFYFNKAWS KLTGRTADKL
MVSGWHDLIH ELDRQRFQDV HGAAFAKRAS YSDEIRVLGQ DGSYHWLVKK GTPRFLSDGT
FAGYISSCID ITQRKLDEQK LQSLNEKLAA SNEEFAALNE ELATTNEELA ASYDELVLSE
ARFRNLIKQA PVAICVIRAN DLMITEVNTG YLELVGKQLA QLENHTIWDA VAEAAEVYAP
LMQQVISTGI PFHAREHELI LVRNGIDETV FVDFVYEPVT DLQGQVTSIM VVGNEVTDKV
LARRRIEDAE ERSRLAIEAA EIGTYEFSYI DGSLTSSERF NEIFGLQEPV SRERVLATYH
PLDEGVSEQA HAIAKQTGRL FYETRLLLTG GALKWIRVQG NVHYSSEGVL KKLLGTVIDI
TEFKRLQQQK DDFISIASHE LKTPITSLKA SLQLLERMKA NPTPMLSRLI EQSNRSMEKV
SVLVDDLLNV TRINEGQMAL VKKKFSFNKM IDECCSQVRQ LGTHELVVQG VKELQIVADE
NRIEQVISNF VTNAVKYATA SREIFLKIED LDQQVKISVR DTGPGIPANK LPHLFDRYFR
ADQTGAQVSG LGLGLYICAD IIKRHGGEIG VDSIEGVGST FWFTIPIGG
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