| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1751 |
|---|
| Symbol | |
|---|
| ID | 8252853 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 2058749 |
|---|
| End bp | 2059600 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 644935401 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003092022 |
|---|
| Protein GI | 255531650 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01784] conserved hypothetical protein (putative transposase or invertase) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.000562915 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGAAG AAATCAACCA CCCTGTACAA GGAAGCAAAT ACGACAAGAT TTTTAGGGAA
AACATGCACA ATACCCTACC TGGTATAATT AAACACGTCC TTCATTTAAA CGTCAATACT
GTTGAAGAAC TTGCCGATGA TGTACAATTT ACCAAAGAAA GAAAAACAGA TTTACTAAAG
AAGGTTAGGG ACAACAAGGG CAACAGATAT GTGCTGCATG TTGAATACCA AACGGATAAT
TATCCGGAAA TGGCTTTTCG TATGGCAGAG TATAGCATCA TGTTGCAAAG AAAACATAAG
TTGCCTGTTA AACAGTTCGT AATTTACATT GGCCCTGCCA AAGCAAATAT GGCCACTTCT
ATCACAACTA AGGATTTCCG ATTCCGCTAC AACTTAACAG AGCTCTCTGC TGTAAACTAT
AAACTGTTCT TAAAATCAGA TTTGGTTGAG GAGAAAATGC TGGCAATTTT AAGTAATTTA
GCATCAGAAA GCACAGAAAG TGTATTGGCA CAGGTTGTTC AGGAAATAGA AACCCATACT
TCTACATTAG AACAAGGGCG TTATTTTAGA CAGCTACGGA TACTTTTGCA ATTACGTAAT
TTAAATAAAA AAGCAATTAA AGATATGGCA CTGGTAGGAA AAATATTTAA AGAAGAAAAA
GACATTTTAT ATCGTAGAGG CGAAATTAAA GGCGAAATTA AAGGCGAAAT TAAAGGCGAG
ATTAAAGGTA TTGAAAAAGG TCGTTATGAA GAAGCAATGG AAATTGCTCT TGAACTTAAA
AAAGAAGGAT TAGCTACAGA ATTTATTGCT AAAATCACTA AGCTTTCAAT TGAAGAAATC
CAGGCACTAT AG
|
|---|
| Protein sequence | MPEEINHPVQ GSKYDKIFRE NMHNTLPGII KHVLHLNVNT VEELADDVQF TKERKTDLLK
KVRDNKGNRY VLHVEYQTDN YPEMAFRMAE YSIMLQRKHK LPVKQFVIYI GPAKANMATS
ITTKDFRFRY NLTELSAVNY KLFLKSDLVE EKMLAILSNL ASESTESVLA QVVQEIETHT
STLEQGRYFR QLRILLQLRN LNKKAIKDMA LVGKIFKEEK DILYRRGEIK GEIKGEIKGE
IKGIEKGRYE EAMEIALELK KEGLATEFIA KITKLSIEEI QAL
|
|---|
| |