Gene Phep_1721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1721 
Symbol 
ID8252823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2040064 
End bp2040375 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content44% 
IMG OID644935373 
Producthypothetical protein 
Protein accessionYP_003091994 
Protein GI255531622 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000148529 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.000155428 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTGAGG AAAAGAAAAA CACAGGTTCT TTGCTGTCAG GGCAGGAACC TCATCAGAAG 
GAAGATTTTG ATCAGGCTGA AAGAGCGAGT GCTGCTTCTT TTGAACTTGA TCCTGATAAA
GGGATTACTC CTGACCCGGA AGAATATAAT CAGGGAGATG AGCAGGGTAA TATAAAGCAA
ATGCCTAAAG CAGATCATGT TGGTTCAGGC GGATTTGATC CGGTAAATGC TAACCCGGAT
TTAGATGCCG GAGCATCTGA TGTAACCACA GAAGATCTTA AAAGCCTGGA CGCACTAGAT
AGAGACCACT GA
 
Protein sequence
MSEEKKNTGS LLSGQEPHQK EDFDQAERAS AASFELDPDK GITPDPEEYN QGDEQGNIKQ 
MPKADHVGSG GFDPVNANPD LDAGASDVTT EDLKSLDALD RDH