| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1716 |
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| Symbol | |
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| ID | 8252818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2037365 |
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| End bp | 2038348 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644935368 |
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| Product | PAS sensor protein |
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| Protein accession | YP_003091989 |
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| Protein GI | 255531617 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00344833 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0000813906 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATCAATC TCCCTGTTAA TGCAAATCCG AACGATGCAG AATCGGCCAG TTTTAAACGA
ATTTTTGAGG AGAACCCCGC GCCAATGTAC ATCTTTGATT TACATACTCA TGAATTTCTT
GCAGTAAACG CAGCAGCTCT AGATCAATAC GGATACCAAA AAGAAGAATT CCTATCCATG
AGTGCCTTGC AAATCAGGTC AGCACAAGAG GTTGAGCGGT TCAAAAAAGC TATCCTGGAA
GTAAGGGCTG CTTATTCCGA CTATGGAGTG TGGAAACACA TCCGTAAAAA TGGCGAAGAG
TTCTTCGTTC ATATTTATGC ACACTGCAAT ATTTTCCAGA ACAGAGTGGC CAGGGTAGTC
ATGGCAATTG ACATCGATCA AAAAGTTAAG GCAGAAAATG CGCTAAAAGA AAAAAACGAA
GAGATTGCCG ATATTCTGGA AAGCATCACC GATGGCTTTT ATGCGATGAA CGAAAACTGG
GAAGTTACCT ACATCAATAA AGAGGCAGAA CGGATCCTGA ACTGTAAAAG AACCGATCTG
TTAGGAAAAA ACCTCTGGGA ATTTTTTCCC GGATCAAAAG AAGGACGGTT TTATCAGGAA
TACAAACGTG CGCTAGAGGA AAAAATAAGT GTACATTTTG AAGAATGCTA TGCACCTCTT
GGCGTTTGGG GATCGATGCA TGTATATCCC AAAAAAGACG GCCTGGCCAT TTATTTTGTT
GACATTACTG AGCAAAAGAA AAATCAGATT GAGCAATCCA GGTACATGAA CATGATTGAA
AAACAAAACG AACAACTAAA AAAGATATCA TGGATACAAT CGCACGAGTT GAGGTCCCCG
CTTTCCAACA TACTGGGCCT TTTAGAGCTG GTCAATGAAA ACTCATGCAA TGCCGATGTA
ATAGAAAAAT TAAAAAAAGC GGCGAAAAGC CTGGATGATG TAGTACGGAA CATAACAGAA
CACGCACAGA AAACCATAAA TTAA
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| Protein sequence | MINLPVNANP NDAESASFKR IFEENPAPMY IFDLHTHEFL AVNAAALDQY GYQKEEFLSM
SALQIRSAQE VERFKKAILE VRAAYSDYGV WKHIRKNGEE FFVHIYAHCN IFQNRVARVV
MAIDIDQKVK AENALKEKNE EIADILESIT DGFYAMNENW EVTYINKEAE RILNCKRTDL
LGKNLWEFFP GSKEGRFYQE YKRALEEKIS VHFEECYAPL GVWGSMHVYP KKDGLAIYFV
DITEQKKNQI EQSRYMNMIE KQNEQLKKIS WIQSHELRSP LSNILGLLEL VNENSCNADV
IEKLKKAAKS LDDVVRNITE HAQKTIN
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