Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1696 |
Symbol | |
ID | 8252798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 2005463 |
End bp | 2006797 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644935348 |
Product | glucose/galactose transporter |
Protein accession | YP_003091969 |
Protein GI | 255531597 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | [TIGR01272] glucose/galactose transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0309117 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.239808 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAAAA CAAATGTAGC AGCTGTCGAC GTCAGTTCTC TGAGCAAGTG GGATACGGTT ATCTCCATTT TTATCATTGG TTTATTGTTT TTTATTTTTG GTTTTGTAAG CTGGGTAAAT GCCATATTGA TTCCTTATTT CAAAATTGCC TGTGAACTCA ATAACTTTCA ATCCTATCTT GTTGCCTTTG CATTTTACAT CTCTTATTTT GTGATGTCGG TTCCCTCTTC CTATCTTTTA AAATCAGTAG GTTTTAAGAA AGGAATGATG ATCGGTTTCT GGACGATGGC GGTTGGTGCA TTTATTTTTG TACCTGCTGC TTTTTCCCGT ACCTACGAAG TCTTCCTGCT GGGGCTGTTT ACATTGGGCT CAGGCCTGGC CATTTTACAA ACGGCGGCCA ATCCCTACAT TACTGTGCTC GGACCAAAGG AAAGTGCTGC CCAGCGCATC AGTATTATGG GTATATGCAA CAAAGGTGCA GGTATACTTG CGCCTCTGCT GTTTGCTGCA GTCATATTAA GGGCAACAGA TGGTGACCTG TTTAAGCAAT TGCCTTTAAT GGATGCCGCT GCCAAAAGTG CGGCGCTTGA CGAGCTCATC AGAAGGGTAA TTGTACCTTA TTCCTGTGTA GGTACAGTAT TGCTGTGCCT GGGGCTGTTT GTCCGCTTTT CTCCACTTCC CGAGATCAAT ACCGAGCATG AGAGTGAAGA TGTAGCCCTG GCGAATTCCG GTAAAACCAG TATTTTTCAG TTTCCTCATT TGATTCTTGG TGCTTTTGGT ATATTTCTGC ATGTAGGTAC ACAGGTTATC GCTATAGATA CCATTATCGG TTATGCCGGA TCGATGAATA TCCAGCTACT TGAAGCAAAA GTATTTCCTT CTTATACGCT GTTTGTAACC ATTTGTGGTT ATCTGTTAGG CATTACAACC ATTCCAAGGT TTATTAGCCA GGTCAATGCT TTAAGGGTAT GCACCATTCT GGGTGGTATT TTTACTTTGT TAATTATTTA TGCAAAGGGA CAGGTTATCT TTTTGGGTCA TGCTACTGAT ATCTCTATCT GGTTTGTAGT ATTGCTTGGT TTTGCCAATT CACTGGTTTG GGCGGGTATG TGGCCGCTTG CCCTTGATGG TTTGGGCCGT TTTACCAAAG TGGGAGCTTC TTTAATGATC ATGGGCTTAT GTGGAAATGC AATTATGCCA CTTTTTTATG GATATTTTGC AGATTTATTT AACCTGAGAG CTGCATACTG GGTTTTATTC CCTTGTTACG TTTACCTTAT ATTTTATGCA ATTTACGGCC ATAAACTTCG GAGCTGGTCC TTTAAAACTT CTTAA
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Protein sequence | MRKTNVAAVD VSSLSKWDTV ISIFIIGLLF FIFGFVSWVN AILIPYFKIA CELNNFQSYL VAFAFYISYF VMSVPSSYLL KSVGFKKGMM IGFWTMAVGA FIFVPAAFSR TYEVFLLGLF TLGSGLAILQ TAANPYITVL GPKESAAQRI SIMGICNKGA GILAPLLFAA VILRATDGDL FKQLPLMDAA AKSAALDELI RRVIVPYSCV GTVLLCLGLF VRFSPLPEIN TEHESEDVAL ANSGKTSIFQ FPHLILGAFG IFLHVGTQVI AIDTIIGYAG SMNIQLLEAK VFPSYTLFVT ICGYLLGITT IPRFISQVNA LRVCTILGGI FTLLIIYAKG QVIFLGHATD ISIWFVVLLG FANSLVWAGM WPLALDGLGR FTKVGASLMI MGLCGNAIMP LFYGYFADLF NLRAAYWVLF PCYVYLIFYA IYGHKLRSWS FKTS
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