Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1678 |
Symbol | |
ID | 8252780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 1985087 |
End bp | 1986088 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644935330 |
Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
Protein accession | YP_003091951 |
Protein GI | 255531579 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATAG CATTTTTTTC TGCCAAACCT TATGACAAAA CATTTTTCAA CAGGTACAAT GAAGCATATG GTTTTGAGTT GGAGTTCTGG GAAACACATC TGGGGCCGCA TATCGTAAAT GCCATCACAC CGGGCACTGA AGCTGTTTGC GTATTTGTAA ACGATAAACT TACCGGCGAA GTGATCGATA TCATGGCGGC AAAAGGCGTT AAAATAATAG CTTTACGCTG TGCCGGCTTC AATAATGTAG ACCTGGAAAG GGCTAAAAAA CAGGGCATCA GAATCTGCAG GGTCCCTGCA TATTCTCCCG AAGCTGTTGC AGAACATGCC GTTGCTATGC TGCTCACCTT AAACAGAAAA ACACACAAAG CCTATAACCG TGTACGTGAG CAAAACTTCT CGCTCAACGG TCTGCTGGGT TTCAACCTGT ATGGTCGTAC AACAGGTGTT ATCGGAACAG GTAAAATAGG GAAAGCGTTC ATCAAAATTA TGCTGGGCTT TGGTTGCAAA GTTTTGGCCT GCGATCTCTA TGAAGATGAA ACATTAAAAG CTGAAGGTGT TCAGTACCTC TCTTTCGACG AGGTATTAAA CCAGTCAGAC ATCCTGTCTC TCCATTGTCC ACTTAATGCC GAAAACCACT ACCTGATCAA TGAAAGCAGC ATCGTTAAAA CGAAAAAAGG TGTCACCATC ATCAACACCA GTCGCGGCGG ATTACTCAAC ACACACGATG TGATCCAGGC TTTAAAATCC GGACATATTG CTTATCTGGG AATAGATGTT TACGAACAGG AAGAACAGCT TTTTTTCAAA GATCTTTCAG GATCTATCAT AGCAAATGAC GAGATCCAAC GCTTAATGAG CTTTCCCAAT GTACTGGTTA CCGGTCATCA GGCTTTTTTT ACAGAAGAAG CCCTTTCACA AATCGCCACG ATTACCTTAA ACAGTATCGA TCACCTCATT AAAGGTTCCG CACCAGCAGA TCCGTCTGTA TTGCTCGTGT AA
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Protein sequence | MKIAFFSAKP YDKTFFNRYN EAYGFELEFW ETHLGPHIVN AITPGTEAVC VFVNDKLTGE VIDIMAAKGV KIIALRCAGF NNVDLERAKK QGIRICRVPA YSPEAVAEHA VAMLLTLNRK THKAYNRVRE QNFSLNGLLG FNLYGRTTGV IGTGKIGKAF IKIMLGFGCK VLACDLYEDE TLKAEGVQYL SFDEVLNQSD ILSLHCPLNA ENHYLINESS IVKTKKGVTI INTSRGGLLN THDVIQALKS GHIAYLGIDV YEQEEQLFFK DLSGSIIAND EIQRLMSFPN VLVTGHQAFF TEEALSQIAT ITLNSIDHLI KGSAPADPSV LLV
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