Gene Phep_1674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1674 
Symbol 
ID8252776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1980506 
End bp1981231 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content43% 
IMG OID644935326 
Product6-phosphogluconolactonase 
Protein accessionYP_003091947 
Protein GI255531575 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0363] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase 
TIGRFAM ID[TIGR01198] 6-phosphogluconolactonase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTAC TGATCTATAA AACACAGCCT GAACTGCTCG AAGACCTTGC CGCTTATATC 
ATCAAAATAG CCAACAAGGC CATCGCCGAA CAAGACTGCT TCAATTTTGT ACTTACAGGT
GGCAACTCGC CAAAGGCCCT GTACGAAATG CTGGCCACTA CCTATAAGGA CCAAATAGAC
TGGAGCAAAG TTTATTTCTT TTTTGGTGAT GAGCGTAACG TAATGCCTAC ACATGAAAGT
TATAATGGCC TGATGGCAAA AAAGGCCATA CTGGACCCAC TTAACATTCC TGAAAGCCAG
ATCTTTTATG TAAATACTAC CCTGGCGCCC GAAAAAGCCG CTATAGAGTA CAACAAAGCA
ATTGTAAAAC ACTTTGACGG GGCCGACCTC GTATTTGACC TCATCTTGCT GGGCATGGGC
GATGATGCAC ACACTGCATC CTTGTTTCCA GGTACGGATA TTTTAAACAA TAAAAATGTA
GAGATCGATT CGGTATTTGT AGAAAAACTC TCTACCTATC GCATCAGCTT TACCGCCCCT
TTAATCAATA AGGCAAAAAA TGTTGCCTTC CTGGTTTTTG GCGAAAACAA AGCTAAAGCG
GTAAAAGAAG TAATTGAAAG CAAAAAAAGA AATACCAGAC TCTATCCCGC ACAATTGATC
AATCCGATTG ATGGCGGGGT TACCTGGTTT CTGGACGATG CGGCTGCAAG TCTGCTCGAC
AATTAA
 
Protein sequence
MNLLIYKTQP ELLEDLAAYI IKIANKAIAE QDCFNFVLTG GNSPKALYEM LATTYKDQID 
WSKVYFFFGD ERNVMPTHES YNGLMAKKAI LDPLNIPESQ IFYVNTTLAP EKAAIEYNKA
IVKHFDGADL VFDLILLGMG DDAHTASLFP GTDILNNKNV EIDSVFVEKL STYRISFTAP
LINKAKNVAF LVFGENKAKA VKEVIESKKR NTRLYPAQLI NPIDGGVTWF LDDAAASLLD
N