| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1642 |
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| Symbol | |
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| ID | 8252744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1942713 |
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| End bp | 1943765 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644935296 |
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| Product | chalcone and stilbene synthase domain protein |
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| Protein accession | YP_003091917 |
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| Protein GI | 255531545 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3424] Predicted naringenin-chalcone synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00774069 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGCGTAA AAATAACGAC CGTTACCAGC CTGACACCGC AATATTCCAG AACAACAGCA
GAGATACTCC CCTTTCTGGA CACCTGGCTA CATGGACAGG AACCCCGTTT TATCAGAAAG
GTAAAAAAGA TATTTGAGCA GGCCGATGTG GATAAAAGGT ATTCGATCAT GTCGCCCGAA
GAAGTGTTTA ACCAAAGCTC CTTTGCAGAA AAAAACAACA TTTACATCCG CGAAGGGATT
AAACTGGCCT CCGGCTGTCT GGCCATGGCC CTGGAAAAAT CGGGATGGAA AGCACAGGAA
CTGGACTATA TCATCACGGT AAGCTGTACG GGTATCATGA TCCCCTCTAT TGATGCCTAT
CTCATCAATG CCTTAAACCT GCGCCAGGAT ATTGTGCGCC TGCCGGTAAC AGAAATGGGT
TGCGCCGCGG GTATATCTGG GATGATCTAT GCCAAGAATT TTTTAAAGGC CAATCCGGGT
AAACGTGCGG CAGTAATTGC TGTAGAATCG CCTACCGCAA CTTTCCAGCT CAACGATTTT
TCTATGGCCA ACATCGTGAG TGCCGCTATT TTTGGCGACG GTGCAGCCTG TGTTTTATTG
TCCTCGCTGG ACGAAGATAA AGGACCGGAA ATCATTGCCG AAGAAATGTA CCACTTTTAC
GACAGCATAC CCATGATGGG CTTTAACCTT TGCAACACTG GCTTACAAAT GGTGCTGGAT
GTAGAGGTTC CGAAAAACAT TGAAATGCAT TTCCCCGATA TCATCCACCC CTTCCTGGCC
AGAAACGGAC TGAAGATAGC AGACATTGAC CATCTGATCT TTCATCCCGG AGGAAAAAAA
ATTATTCAGA CAGTTGAAGG GTTATTTGGT AAATTAGGCA AAAATATAAA CGAAACTAAA
AACATTTTAC GGGAATACGG AAATATGTCG AGCGCCACAG TACTGTATGT ACTGGAACGT
TTTATGGAAC GCGAACCGGG AAGTGCAGAA CTGGGCCTGA TGCTGAGCTT TGGGCCAGGG
TTTTCGGCAC AACGTATTTT GCTGAAATGG TAA
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| Protein sequence | MSVKITTVTS LTPQYSRTTA EILPFLDTWL HGQEPRFIRK VKKIFEQADV DKRYSIMSPE
EVFNQSSFAE KNNIYIREGI KLASGCLAMA LEKSGWKAQE LDYIITVSCT GIMIPSIDAY
LINALNLRQD IVRLPVTEMG CAAGISGMIY AKNFLKANPG KRAAVIAVES PTATFQLNDF
SMANIVSAAI FGDGAACVLL SSLDEDKGPE IIAEEMYHFY DSIPMMGFNL CNTGLQMVLD
VEVPKNIEMH FPDIIHPFLA RNGLKIADID HLIFHPGGKK IIQTVEGLFG KLGKNINETK
NILREYGNMS SATVLYVLER FMEREPGSAE LGLMLSFGPG FSAQRILLKW
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