Gene Phep_1637 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1637 
Symbol 
ID8252739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1939377 
End bp1940273 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content44% 
IMG OID644935291 
ProductPpx/GppA phosphatase 
Protein accessionYP_003091912 
Protein GI255531540 
COG category[F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0248] Exopolyphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0606324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0168226 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAGAT ATGCTGCCAT AGATATAGGT TCAAATGCGG TTAGGTTGTT GATTGCGGAT 
ATCTCCAAAA CCGAGAATGG TTATGGGTTT AAAAAAAACA CCCTGGTGCG GGTTCCGTTA
CGCCTGGGCG ATGATGCTTT TTTAGACCAT CACATCTCGG CACGTAAAGT GGAGGAGCTG
CTGAAAACCA TGTCGGCCTT TAAAAACCTG ATGGAGGTAT ACCATGTCTC GGCCTATCTG
GCCTGTGCTA CTTCTGCCAT GCGTGAAGCC GGAAACGGAG CAGATATCAT CAAAATGATA
AAGAAACAAT GCGATGTAGA CCTGGAGATC ATCGCCGGAC AAAGGGAAGC CAATATCATT
TATGCCAATC ACATTGAAGA AAACCTGGAC ATCAAAAAAA GCTATCTGTA CATTGATGTA
GGTGGGGGCA GCACCGAGCT TTCTGTATTT GTAAACCGCG TACCTGTGGC TTCCAAATCT
TTTGATATCG GCACCATCCG CATCCTAGAC AATCAGGATA AGGACGAAAC CTGGGAAGAA
ATGAAAAGCT GGGTAAAGGA ACATACAAAA TCCTTAAAAA ACCTGGCCGG TATAGGAACC
GGGGGCAATA TCAATAAACT TTTCCGTATG TCTGACGAGA AAGAGGGCAT GCCCTTAACG
TTCCTCAAAT TGAAAAGCAT GTATAACCAG CTCAATTCGC ACTCGCTTAA AGAAAGGATC
AGTGTTTTTG GTTTAAACCC TGACAGGGCC GATGTCATTA TCCCTGCCTG CGAAATTTAC
ATCACTTTGT TAAAATGGAC GGGGATCAAA CAGATCTATG TGCCAAAAGT AGGGCTGGTA
GATGGCATCA TCAGTCTGCT CATTGAAGAG AACCTGAGCG AGGCCGTTTA TAAATAG
 
Protein sequence
MLRYAAIDIG SNAVRLLIAD ISKTENGYGF KKNTLVRVPL RLGDDAFLDH HISARKVEEL 
LKTMSAFKNL MEVYHVSAYL ACATSAMREA GNGADIIKMI KKQCDVDLEI IAGQREANII
YANHIEENLD IKKSYLYIDV GGGSTELSVF VNRVPVASKS FDIGTIRILD NQDKDETWEE
MKSWVKEHTK SLKNLAGIGT GGNINKLFRM SDEKEGMPLT FLKLKSMYNQ LNSHSLKERI
SVFGLNPDRA DVIIPACEIY ITLLKWTGIK QIYVPKVGLV DGIISLLIEE NLSEAVYK