Gene Phep_1626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1626 
Symbol 
ID8252728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1926425 
End bp1926790 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content38% 
IMG OID644935280 
Producthelix-turn-helix domain protein 
Protein accessionYP_003091901 
Protein GI255531529 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.365666 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGAAA TTCTATCAAA GAAAGAGATT GGTGAACGCA TAAAGGACTT AAGAACGCAG 
CACAACCTTT CGCAAGCATT TATTGCCAAT ATTTTAAATT TATCAAGAAG TAATTATTCT
CAAATAGAAC TTGGCAACCA GTATCCTTCG TTCAACACCC TACACGAAAT CGCCAGGTAT
TATAGCAAGA CCTATGATTG GCTGCTACAT GGCACAGATA CTAAGGCCGC AACGGAAAAT
CCTGCCAAAA TAGACCTTAT TTTAAATGAC CTCGAAACTT CATTCAGGAG TTTCACCAGC
TCACTAAAAA AACTGGAACA GGAATTAAAC CACATCAAAT CAAGAAGAGC CAAGGTTAGG
GTATAA
 
Protein sequence
MQEILSKKEI GERIKDLRTQ HNLSQAFIAN ILNLSRSNYS QIELGNQYPS FNTLHEIARY 
YSKTYDWLLH GTDTKAATEN PAKIDLILND LETSFRSFTS SLKKLEQELN HIKSRRAKVR
V