Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1614 |
Symbol | |
ID | 8252716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 1914500 |
End bp | 1916404 |
Gene Length | 1905 bp |
Protein Length | 634 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644935268 |
Product | Beta-N-acetylhexosaminidase |
Protein accession | YP_003091889 |
Protein GI | 255531517 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3525] N-acetyl-beta-hexosaminidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAAAA AACTATTAGC TATTGGTTTA CTGGCCCTTT TGTATGTTCC TGTTTTTGCC CAAAATGATG TAAATATGGG AATTATCCCT GCTCCGGTGT CTGTAAAAAA AGGTGCAGGA ACTTTTAAAT TGGATAAGAC TGTAGTTTTG ATATCGAATG AGGTTAAAAA TTCGAAATCG GCTGATCTTT TAAATGCTTT TATTGTAAGC AAGGCCGGCT TTTCTTTAAG AGAAGCCAAA TCTGCGATGG CCAATGAGCG GGCCATTGTA CTGAGTTCTG CTGCTGCGGA ACAATTGCCT GCCGAAGGTT ATAAAATAAG CATAAACCCT AAAACCATTA CCATTACCGG AAAGGCTGCG GGCTTATTTT ATGGTGTACA ATCTGTTATG CAGCTGATGC CGGACAAACA GCACAATGAG ATCCTGATTC CTGCAGCTGA AATTAACGAT TACCCAAGGT TTAAATACAG GGGCCTGCAC CTGGATGTTG GAAGGCACGT GTTCCCTGTT GCTTTCATCA AGAAGTACAT CGACCTGATG GCCCAGTATA AACTGAACAA TTTTCACTGG CACTTAACTG AAGACCAGGG CTGGAGGATT GAGATTAAAA AATACCCTAA ATTAACCGCT ACCGCTGCCA GCAGAAACGG AACGATTATC GGGCACTACC CAGGTGTAAA TAACGACGGA GAAGTTTATA AAGGTTTTTA TACGCAAAAT GAAGTAAAGG AAGTTGTAGC CTATGCTATG GCGAGGTTCA TCAACGTAAT CCCGGAAATT GAAATGCCGG GACATGCGAG TGCGGCAATT GCGGCTTACC CTGAGCTGAG CTGTTTCCCG GATAAAGACA CCTTTGTGGC CGACGTTACA CCCTGGGCAG GTTCGCGTAA AGGTAAGCAG GTACAGCAAA CCTGGGGCGT ATTCGACGAC GTATTTGTAC CCTCGGAAAA TACCTTTAAG TTTTTGGAAG ATGTTTTAGA TGAGGTCATT GCGCTTTTCC CTTCTAAATA CATCCACATC GGTGGGGATG AATCTCCTAA GAAATACTGG GAGCAAAGTG AGTTTTGCCA GAAATTAATC AAACAGCTGG GCTTAAAAGA TGAGCACGAA CTGCAGAGTT ATTTCATCCA GCGCATTGAA AAATATGTAA ATTCTAAAAG CAGGAGCATC ATAGGCTGGG ATGAAATTTT AGAAGGAGGG TTGGCACCCA ATGCAACTGT AATGTCCTGG AGAGGTGTAA AAGGGGGGAT TGCAGCAGCG CAGCAAAAGC ATGAAGTGAT CATGACCCCA AATGCAGGTG GTCTGTATTT TGACCACAAG CAATCTGAAT CTGCCGATGA ACCCACCAAT ATCGGTGGTC TGGCACCTTA TTCCAAATCA TACAACTATG ATCCGGTACC TGCCGAACTT GCACCTGATG AACAGAAATA TGTGATAGGG GTGCAGGCAA ATGTCTGGAC AGAGTACATT CAAAGCGCTG CCAAAGTGGA GTACTTTTTG CTGCCCAGAC TGTTCTCTTT ATCGGAGATT GCGTGGAGCC AGGCTTCAGG TAAAGACTTT AAGAATTTTT CGGAAGAGCG CTTGCCTTTG CACCTCTCGA GGCTGGATAA AACAGGTACC AATTACTGGG TACCCACACC CTTAGGCCTG AATCAGAAAG TGCTGAACGG TGAAGATTTC AGCATTACCT TGAAAGAACC CATCCCGGGA GCTAAGATTT ATTATACCTT AGACCTGACC CGCCCTTCAG AAATAGGGGA ACTGTATACC AAACCCATTA AAGTAAAAGT ACCGAAAGGC CAGAAACAGA TTTTGAAAAC CATTGTTGTT ACAGCAGCTG GTAAACGGAG TGTGGTAACT GAAACTATTT TAAACAACGG AAGTGCTGAA GTGGCCGCTA AATAG
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Protein sequence | MMKKLLAIGL LALLYVPVFA QNDVNMGIIP APVSVKKGAG TFKLDKTVVL ISNEVKNSKS ADLLNAFIVS KAGFSLREAK SAMANERAIV LSSAAAEQLP AEGYKISINP KTITITGKAA GLFYGVQSVM QLMPDKQHNE ILIPAAEIND YPRFKYRGLH LDVGRHVFPV AFIKKYIDLM AQYKLNNFHW HLTEDQGWRI EIKKYPKLTA TAASRNGTII GHYPGVNNDG EVYKGFYTQN EVKEVVAYAM ARFINVIPEI EMPGHASAAI AAYPELSCFP DKDTFVADVT PWAGSRKGKQ VQQTWGVFDD VFVPSENTFK FLEDVLDEVI ALFPSKYIHI GGDESPKKYW EQSEFCQKLI KQLGLKDEHE LQSYFIQRIE KYVNSKSRSI IGWDEILEGG LAPNATVMSW RGVKGGIAAA QQKHEVIMTP NAGGLYFDHK QSESADEPTN IGGLAPYSKS YNYDPVPAEL APDEQKYVIG VQANVWTEYI QSAAKVEYFL LPRLFSLSEI AWSQASGKDF KNFSEERLPL HLSRLDKTGT NYWVPTPLGL NQKVLNGEDF SITLKEPIPG AKIYYTLDLT RPSEIGELYT KPIKVKVPKG QKQILKTIVV TAAGKRSVVT ETILNNGSAE VAAK
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