Gene Phep_1594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1594 
Symbol 
ID8252696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1887281 
End bp1888750 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content47% 
IMG OID644935248 
Productinosine-5'-monophosphate dehydrogenase 
Protein accessionYP_003091869 
Protein GI255531497 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0516] IMP dehydrogenase/GMP reductase 
TIGRFAM ID[TIGR01302] inosine-5'-monophosphate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.221976 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTCG ATCCCAATAA ATTTATAGCT GAAGGACTAA CTTACGATGA CGTATTATTA 
GTACCTGCCT ACTCTGAAGT TCTGCCACGT GATGTGGATA CCGGAAGTTT CCTGACCAAA
AAAATACGTA TTAATGTTCC TATAGTTTCT GCCGCAATGG ATACAGTTAC TGAAGCGGGC
CTGGCCATTG CCATTGCCCA GGCCGGTGGT ATTGGCATGT TGCATAAAAA TATGAGCATT
GAGCGCCAGG CAGAAGAAGT AAGAAAGGTA AAACGTTCGG AAAGCGGTAT GATCCAGGAT
CCTGTTACCC TGAGTGCAAA TGCCAGAGTT GCCGATGCTT TCCAGATCAT GAAAGATTTT
AAGATCGGTG GTATCCCCGT TATTGATGCA GATAATAAAC TGGTGGGCAT CATTACCAAC
AGGGACCTGC GGTTCCAGAA AGATATGCAG CGTAAGGTCT CGGAAGTAAT GACCAGGGAA
AACCTGATCA CCGCACCGGA AGGGACTACA CTTTTACAGG CCGAAGAGAT CTTACAGGAT
TATAAAATTG AAAAACTCCC GGTTATTGAT GCGCAGGGGC ACCTGGCCGG ACTGATTACT
TTTAAAGATA TTCAGAAATA TAAAAATTAC CCTAAAGCCT GTAAGGATGA ACGTGGCCGT
TTGCGTGTTG GCGCTGCGGT AGGTGTGGCG GCTGATAACA TTGACCGCGT TGCGGCACTG
GTACAGGCAG GAGTGGATGT GGTAACGGTT GATACTGCCC ATGGCCACTC GAAAGGTGTC
ATTGATATGG TAAAGGCCAT TAAAGAAAGA TGGCCCGATC TGCAGGTCAT TGCAGGTAAT
ATTGCTACTG CAGATGCTGC GCTGGCATTG GCGGCTGCAG GTGCCGATGC GGTTAAAGTG
GGCATTGGTC CGGGTTCTAT CTGTACTACC CGTATCATCG CAGGTGTGGG TGTGCCTCAA
CTGTATGCTG TTTTTGAATG TGCCCAGGCT TTGATCGGGA CAGGGATTCC GGTTATTGCT
GATGGTGGTA TTAAGCAGAC CGGCGACATT GTGAAAGCCA TTGCCGCTGG TGCCAGTGCA
ATCATGGCTG GTTCATTGTT TGCAGGTGTT GAAGAATCAC CAGGTGAAAC CATCATCTAT
GAAGGACGTA AATTTAAATC ATACCGTGGT ATGGGTTCGG TTGAGGCCAT GTCACAAGGA
TCAAAAGACC GTTATTTTCA GGACGAGACC GATGTGGTGA CCAAATTGGT ACCGGAAGGG
ATTGTTGGCA GGGTACCTTA TAAAGGAACA TTGGCAGAAG TAATTTATCA ATATGTAGGT
GGCCTGAGGG CTGGAATGCA CTATTGCGGT GCAGCTGCCA TTGAAGATCT GCAAAAAGCC
AAGTTTGTAC GCATTACCGC TGCAGGAATG AGGGAAAGCC ATCCGCATGA TATTTCTATC
ACTAAAGAAG CGCCTAACTA TTCGAGATAA
 
Protein sequence
MQLDPNKFIA EGLTYDDVLL VPAYSEVLPR DVDTGSFLTK KIRINVPIVS AAMDTVTEAG 
LAIAIAQAGG IGMLHKNMSI ERQAEEVRKV KRSESGMIQD PVTLSANARV ADAFQIMKDF
KIGGIPVIDA DNKLVGIITN RDLRFQKDMQ RKVSEVMTRE NLITAPEGTT LLQAEEILQD
YKIEKLPVID AQGHLAGLIT FKDIQKYKNY PKACKDERGR LRVGAAVGVA ADNIDRVAAL
VQAGVDVVTV DTAHGHSKGV IDMVKAIKER WPDLQVIAGN IATADAALAL AAAGADAVKV
GIGPGSICTT RIIAGVGVPQ LYAVFECAQA LIGTGIPVIA DGGIKQTGDI VKAIAAGASA
IMAGSLFAGV EESPGETIIY EGRKFKSYRG MGSVEAMSQG SKDRYFQDET DVVTKLVPEG
IVGRVPYKGT LAEVIYQYVG GLRAGMHYCG AAAIEDLQKA KFVRITAAGM RESHPHDISI
TKEAPNYSR