Gene Phep_1593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1593 
Symbol 
ID8252695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1885051 
End bp1886886 
Gene Length1836 bp 
Protein Length611 aa 
Translation table11 
GC content45% 
IMG OID644935247 
Productmetallophosphoesterase 
Protein accessionYP_003091868 
Protein GI255531496 
COG category[S] Function unknown 
COG ID[COG1520] FOG: WD40-like repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.245606 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGC TCCTTTCTTT TGCCATTCTA TTCAGCTGTT TTATCAACAG CAATGCCCAG 
ACCTTTAAAT ATGCCTTTGT AACTGATACC CATGTGGGTA CAGCTACCGG CGAAGAAGAC
CTGAGAAGAA CCGTAAATGA CATCAATAAA CAAACAGATC TTGACTTTAT AGTGGTTACG
GGCGATGTTA CAGAAATGGG CACCAAATTA GAACTTAAAC TGGCAAAATC TATTTTAAGC
GAATTAAAAA AGCCTTATTA CGTTATACCC GGTAATCATG ATACGGGTTG GTCAGAATCG
GGTGGTGTGG ATTTCATCAG GGAATTTGGC GACGATAAGT TTACATTTGA CCACAACGGT
TATCGTTTTA TTGCCTGCGC TTCGGGGCCC TATGTAAGGA TGTCTGACGG CCATATCCCC
AGGGATGCCG TAATCTGGCT GGATAAAGTG TTAAAAAATA CTTCTGCTAC CATGCCGGTT
ATTTTCATCA ACCACTACCC TGTCGACAAT AGTCTGGATA ACTGGTACGA AGCAACCGAC
AGGATAAAAA AATACAATAT ACAGTATGCC ATCTGCGGGC ATGGCCATTC CAATCAGGCG
CTTAATTTTG AAGGTGTACC CGGTACCATG GGGCGCTCCA ATTTAAGGGC AAAAGATAGT
CTTGGTGGTT ATAACATTGT AACCATGCGC AAAGATTCTG TCCTGTTCGC CGTTAAAAAA
CCCGGTCTTA TGCTTGAACA TCCCTGGAGA AAAATTGCAC TGGGCAAATT CAGCGCAAGC
AGTACCGGAA AGATAGAAAG GCCCTCGTAT GAAATCAATA AGACCTATCC GCAGGTCAAA
AAAGTATGGA GCTACCATGC AGCAGCCAAT GTGGTATTGA CACCTGCAGC CAGCAATGAG
CTGGTTATAT TTGGCAACAG CATAGGCGAG ATAGAGGCTT TATCAATTAA AGATGGCAGC
AAAAAATGGG TTTATAAAAC AAAAGGTGCC ATTTATTCTT CGCCTGCCAT AGCAGACAAT
TTGGTTGTCC TGGGTTCGGG CGATGGCAGC ATTTATGCGC TGCAGCTCAA TACAGGCAAA
CTGCTTTGGA AATTCGATAC CAAAGCTGCC GTTCTGGGTT CTCCGGTGAT TGATAAAGGC
CTGGTTTATA TTGGCGGGAG CGACAACCAC TTCAGGGCAA TTGAACTGAA AACGGGGAAA
GAGCGCTGGG CCTTTAACCA GGTAGAGGGC ACTATTGTAG GCAAACCTTT GTTGTATGAA
GGTAAAGTGA TCTTTGGTTC CTGGGGCCGT CACTTATATG CACTGGACCA ACATACAGGC
AACCTGTTGT GGAAATGGAA CAATGGAAAT GCCAACCGCA TGTTCTCTCC GGCCATGTGC
ACACCGGTAG CCCATAAGGG CATTGTTTAT TTTGCGGCAC CCGACAGGGT ACTTACTGCA
CTTGATGCAA ACAGCGGAGC AACACTTTGG AGAAATAAAG AAGCTACTGT GAGAGAGTCT
ATCGGCCTGT CGGAAGATGG ATCCCTGATT TTTGGCAAAA CCATGAACGA TGAGGTGGTG
GCCTATAAAA CACAGGCTAC GGACCCGGGC ATATTGTGGA GATTAAACAT GGGCTTCGGT
TATGAGCATG TACCTTCTAT GCTGATCGCA AAAGATGGAG AAGTGTTTTT CGGTACACGA
AATGGCGTGG TATATGCTTT TGATCCGCTG GAGCGCAAAA CTATATGGGC ACATAAAATA
GACAACTCTA TGATCAACAC CGTAAATGTA TTGCGTAAAA ATGCGGTTTT GGTGGCTACT
ATGGACGGTG TGGTTAGTTT ACTGAATATT AAGTAA
 
Protein sequence
MKLLLSFAIL FSCFINSNAQ TFKYAFVTDT HVGTATGEED LRRTVNDINK QTDLDFIVVT 
GDVTEMGTKL ELKLAKSILS ELKKPYYVIP GNHDTGWSES GGVDFIREFG DDKFTFDHNG
YRFIACASGP YVRMSDGHIP RDAVIWLDKV LKNTSATMPV IFINHYPVDN SLDNWYEATD
RIKKYNIQYA ICGHGHSNQA LNFEGVPGTM GRSNLRAKDS LGGYNIVTMR KDSVLFAVKK
PGLMLEHPWR KIALGKFSAS STGKIERPSY EINKTYPQVK KVWSYHAAAN VVLTPAASNE
LVIFGNSIGE IEALSIKDGS KKWVYKTKGA IYSSPAIADN LVVLGSGDGS IYALQLNTGK
LLWKFDTKAA VLGSPVIDKG LVYIGGSDNH FRAIELKTGK ERWAFNQVEG TIVGKPLLYE
GKVIFGSWGR HLYALDQHTG NLLWKWNNGN ANRMFSPAMC TPVAHKGIVY FAAPDRVLTA
LDANSGATLW RNKEATVRES IGLSEDGSLI FGKTMNDEVV AYKTQATDPG ILWRLNMGFG
YEHVPSMLIA KDGEVFFGTR NGVVYAFDPL ERKTIWAHKI DNSMINTVNV LRKNAVLVAT
MDGVVSLLNI K