| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1576 |
|---|
| Symbol | |
|---|
| ID | 8252678 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 1862205 |
|---|
| End bp | 1863026 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 644935230 |
|---|
| Product | Phytanoyl-CoA dioxygenase |
|---|
| Protein accession | YP_003091851 |
|---|
| Protein GI | 255531479 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.158036 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.083991 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTATA AATTATCAAG CGCGCAAGTT AGCTTCTACA AAGAAAATGG TTATTTAATT
GTCGAAAATT TTCTTGATGA AGAAGAATTG GAACATTGGC GCAAGACAGT TTTTAGTGCA
GTTGAAAACA GAGCAGGTCA AAAAATGCCT GGCAAAGAAG CAAAAGTTGG TGAAGATGAT
GGGATCAATA AGGATGCTGA TTATTTTGGA AAAGTATTTG ATCAATTGCT GAATCTTTGG
CAAACCGATA AAGGGGTAAA GGAATTAATG CTCGACAGGC GTATCGGTGA AATGGTCAGT
GCGTTGTCAA ATGCAGATGG TGTTCGTATA TGGCATGATC AGGCTTTGTT TAAACGCCCT
TTTGCCAATC CGACTGCCTG GCATTTAGAT ACACCGTTCT GGTCTTTTTC AGATAGACAG
GCGCTGTCGA TATGGGTAGC ACTTGATGAT TCTACTTTAG AAAATGGCTG CTTATACTTT
ATCCCCGGAT CATTTAAGCA TACTAAATTT GAAAATGTGG GAATTGGGAA AAACATGAAT
GGTATATTCG AATTTTATCC TGAATTGGCA CAAATAAATT CTGTAGCAGC TCCTTTAAAA
GCAGGTAGTT GTTCGTTCCA TAATGGGTTG ACCATACACG GTGCCGGACC AAATATGACC
AATGGCTTTA GGAGGGCAAT GACCTGTGCT TATATGCCTG ATGGAAACGT TTTTAATGGG
CAGGCGAATA TTTTGCCTAA AGCCTATCTG GATACTTTAG CAATAGGGGA CTTACTTAAT
AATGAAGAAC AAAATCCCCT AATTTATCAT AAAGCATGGT AA
|
|---|
| Protein sequence | MNYKLSSAQV SFYKENGYLI VENFLDEEEL EHWRKTVFSA VENRAGQKMP GKEAKVGEDD
GINKDADYFG KVFDQLLNLW QTDKGVKELM LDRRIGEMVS ALSNADGVRI WHDQALFKRP
FANPTAWHLD TPFWSFSDRQ ALSIWVALDD STLENGCLYF IPGSFKHTKF ENVGIGKNMN
GIFEFYPELA QINSVAAPLK AGSCSFHNGL TIHGAGPNMT NGFRRAMTCA YMPDGNVFNG
QANILPKAYL DTLAIGDLLN NEEQNPLIYH KAW
|
|---|
| |