Gene Phep_1549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1549 
Symbol 
ID8252651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1834474 
End bp1834857 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content38% 
IMG OID644935203 
Productprotein of unknown function DUF423 
Protein accessionYP_003091824 
Protein GI255531452 
COG category[S] Function unknown 
COG ID[COG2363] Uncharacterized small membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.285438 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.221976 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGAC GTATCCTTTT AACAGCATCA TTGTTTGGTG CCATAGCTGT AATATTTGGT 
GCCTTTGGGG CGCATAGTTT AAAGAATGTC TTAAGTTCCG GATCGCTTGA AATATGGACA
AAAGGAGTGG AATATCAGTT TTATCATACT TTTGCTTTGC TTTTTCTTGC AAATTATGCT
GCCGAAGGCC AGCCTGCAAA ATGGGCATAC AGATTTTTTA CCTTAGGTAT TGTACTGTTT
TCGGGTTCAT TATATTTGCT GGCCACCAGA ACTATTTTAA ATATTGGTTT TGCGAATTTA
ATTGGGCCTG TAACTCCCAT TGGTGGTCTT TGTTTTATAT TGGGCTGGGC CATGTTATTT
TTTACGGTTT TAAAGCGTAA ATAA
 
Protein sequence
MSRRILLTAS LFGAIAVIFG AFGAHSLKNV LSSGSLEIWT KGVEYQFYHT FALLFLANYA 
AEGQPAKWAY RFFTLGIVLF SGSLYLLATR TILNIGFANL IGPVTPIGGL CFILGWAMLF
FTVLKRK