Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1538 |
Symbol | |
ID | 8252640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 1826074 |
End bp | 1826505 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644935192 |
Product | large conductance mechanosensitive channel protein |
Protein accession | YP_003091813 |
Protein GI | 255531441 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1970] Large-conductance mechanosensitive channel |
TIGRFAM ID | [TIGR00220] large conductance mechanosensitive channel protein |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.580363 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.302083 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGATTTG TAAAAGAATT TAAAGAGTTT GCCATTAAAG GCAGTGTAAT GGATCTCGCT GTCGGTGTAA TCATTGGTGG TGCATTTGGT AAGATAATCG ACAGTGTTGT CAACGATTTG GTCATGCCAT TGATCTCAGC AGTGATCGGA TCTGTTGACT TTAGCAATAT GTATGTGGTG TTAAAAGGAA CTGTAACAGA GGGTATGGCA CTTGTTGATG CCAGAAAGGT ACCTGGTACA GTCGTATTTG CTTATGGTAA CTTCATAACG GTAGCCATCA ATTTCCTATT ACTGGCATTG GCTGTGTTTA TGCTGGTTAA AGGAATAAAT TCATTGAAAC GTAAACAGGA GGCTGCTCCT GCTGCACCAG CGGCACCAAC CCAGGATCAG GTATTGCTCA CAGAGATCAG GGACCTGCTT AAAACAAAAT AA
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Protein sequence | MGFVKEFKEF AIKGSVMDLA VGVIIGGAFG KIIDSVVNDL VMPLISAVIG SVDFSNMYVV LKGTVTEGMA LVDARKVPGT VVFAYGNFIT VAINFLLLAL AVFMLVKGIN SLKRKQEAAP AAPAAPTQDQ VLLTEIRDLL KTK
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