| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1500 |
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| Symbol | |
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| ID | 8252601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1778570 |
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| End bp | 1782061 |
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| Gene Length | 3492 bp |
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| Protein Length | 1163 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644935154 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003091776 |
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| Protein GI | 255531404 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00486924 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0635458 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTTT ACAAGCTATT GAAGCATACT GCAGCGTATG CTTCACTTGC AGGTCTGTCG
GGTAGTGGCT CTTCTCCCGT TAAGCTCAAT CAAGCAAACA AAACCAAATG GGTTATGAGA
ATTAAATTAA CATGTTTTTT ACTGTTACTG GGATTGATTC AGGTAAGTGC AGCAAGCTTT
GCACAGAAAG TAAGCTTATC ACTAAAAAAT GTCACATTAG CCAATGTCCT ATCCAATATA
AAACAACAAA CGGGCTATAA CTTTCTATAC AATTTGGATA TGCTCAGCAA GCTGCCGCAC
ATAGATATAG AAGTGCAGAA CCAACAGTTA ACTGCAGTAC TTGAAAAATG CTTTGCCAAT
CAGCCCCTCA CCTTTGTGAT TGAAGAAAAC ACCGTGATCA TAAAACCAAA AACAGCAGAC
GGCCGGATTT TGGCCGTTGA AATTAAAGGG CGGGTAACAG ATCCCAATGG TCAGCCGCTC
CCCGGGGTAA GCGTAAAGCT AAAAGGAAGC AACATAGGGA TAACAACAGG AAGTACGGGA
CATTACCTTA TCAAAGTTCC CGATGCCAAT GGTACCCTCC TGTTCTCCTA TGTGGGATTT
GTTCCCCTCG AGCTTAACAT TAACGGAAAA ACAGAACTGA ACGTCATATT AAAGGAGGAA
CAGACCAGAC TGGACGAGGT TTTAGTGGTA GGTTATGGTG AAGTCAGCCG CAAAGACCTG
ACAGGCTCAG TAGGTTCGGT CAACATGGCG GACATACAAA AAGCACCGGT ACGTTCATTT
GATGAGGCCC TTGCTGGTCG GGTAGCAGGT GTACAGGTAA CCTCTGTTGA CGGTCAGCCC
GGTTCAAACA TCAACATCGT CATCAGGGGC GCAAACTCCA TTACCGGTAC CAATGCCCCT
CTATATGTTA TTGATGGCTT TCCTCTTGAA GATTCCGATA ACAACGCCAT CAATCCCGAC
GATATCGAAT CTATTGAAGT ATTAAAAGAT GCTTCCGCTA CTGCCATCTA TGGTGCACGG
GGTGCCAATG GTGTCATCAT TATTACTACT AAAACTGGTA AAGAAGGGAC ATCCTCCATC
ACCTATAACG GTTACTATGG GCAGCAGGAG GTATTGGAGC GAATGGAGCT TTTCGACTCC
TACGAATTTG TAAAATACCA GTCGGAACGC TATCCAGGTA CGGTTTCAGA CTTATATTTT
AACAGTTCAA GACCAAATCT CGAGTCTTAC AGATTGGTAC CGGCAGCAGA CTGGCAAAGT
AAATTGTTCA GGGTAGCCCC TATGCAGAAC CACAGTTTAG CAGTATTGGG GGGTACCGGT
AAAACAAAGT ACTCCATCTC TGGTAACATC CTTAATCAGG ATGGTGTGAT GGTCAGTTCC
GGCTACAATC GCTACCAGGG GCGTTTCCGC CTAGATCAAA AAGTAAACGA TAAGTTAACC
GTAAGTGGCA ATGTTAACTA CAGTGCCCTG AAAAAATTCG GGGGTTCACC AGTTCCCGAA
AGTGGTAGTT TCCAGTCCAG CGCACTCATG TACAGCGTTT GGGGCTATCG TCCTGTAGTG
GGTAATCCCA ACATCGATAT TGAGGAGGAA AGTATCGATC AGGACATTGA CCTGGTTAAT
GATAAACGTT TCAACCCCCT TCAGAATTAT CAGAATCAGC TTCGGGAGCA GTACACCAAT
ATCTTAAATG CAAATGCCTA TGCCGAATAC AAATGGAATG CTTTTAAATT AAAGGTCTCT
GGTGGTGTAA CACGCTCAGC AAGGCGTTCC GATTCATTTG ACAATTCACT TACCGGCTCA
GGAAGTCCTT TAACACCTCA GGGAATTGCC AATGGTGTAA ATGGCGGGGT ATCTTATCTG
GAAACCAACA ACTATCTGAA TGAAAATACC CTAAGCTATA GCAAAACGTT TGCAAAGCGC
CATAAAGTGT CGGCAGTTGC CGGATTTACC ATTCAGGGCA GAAGCTCAAA TGGCTTCGGT
GCCTATGCAA CACTGGTACC CAATGAACTG CTTGGTGTAT CCGGACTGGA TGAAGGATCT
CCAAAAAGTA TCTCCTCCAA TTCTACCTCC AATACACTGG CCTCTTTCCT TGGAAGGATA
AACTATAGCT ACAGATCCAG ATACCTGGCA ACCCTTTCTT TCCGGGCTGA TGGCTCCTCT
AAATTTGCTC CAGGCAATAA ATGGGGATAT TTTCCTTCAG GGGCCCTCTC CTGGCGCATC
AGTGAAGAGG AATTCATGAA GTCTCTTAAA TTCATTTCCG ATGCCAAATT GAGGGCAAGT
ATAGGCGCAA CCGGAAACAA CAGAGTATCT GATTTCGCCT ACATGTCTAC CTTAAATCTG
CCCAATTCGG CCATTTATGC ATTTAACAAT GCATCGGTTA AAGGTTTAAT TCCAACTGCA
TTGGGAAACA TCAACCTGAT CTGGGAAACC ACCGTACAGA GCGACCTTGG GCTCGACCTG
AGCCTGTTCA AAAACAGGGC GATACTCACG GTCGACCTGT ATCGGAAAAC GACCAAAGAC
CTATTGCTCA ATGCCAATTT ACCACCCTCA CTCGGATTTG CCAGGTCTTA TAAAAATGTA
GGAAGGGTGC GTAACGATGG ATTGGAAGTC AGCCTTGAAA CCACCAACAT TTCAAACAGC
AAATTTACCT GGTCCAGTCA GTTCAACATC TCCTTCAACC GCAATAAAGT CCTCGAACTC
ACTGAAAACC AGGAAGCCCT GGTTAGTATG ATCAACTGGG AAACCAGCTA TAAATCCCTT
CCCCCTTACA TAGCCAAAAT CGGCCAGCCC ATTGGCATGT TTTACGGACT GATCTGGGAG
GGCAACTATC AATACGCAGA TTTCGATCAA CTCCCCTCCG GTAAATATAT CCTTAAATCA
GAGATTCCCA CCAACGGAAA TCCCCGCGAA GACATTCAGC CAGGCGACAT CAAATACAAA
GACCTGAATG GCGACGGCGT TGCCGATTTG TCCGACTATA CCATTATCGG AAACCCTAAC
CCCAATTTCA ATTTCGGCTT TTCCAATAAC TTTGCCTATA AAGGCTTCGA TCTTGGTGTT
TTTCTGCAGG GAGCCTATGG CGTCGATATC ATGAATACCA ACAGGCTGGT GTTTGAAGGA
TTTGGCCGGG CTTCACAGAA CATGTTCGCA ACCTATATCA ACCGCTGGAC ACCCGAAAAC
CAAAACAACA CCTATTACAG GACCCTTGGA TACGGACCTG CAGCTTATTC CAGCAGGGTT
GTTGAAGATG GATCATATCT GCGCCTGAAA ACGGTATCGC TCGGCTATAA ATTCCCTTCA
AAACTACTAA ACAAGTATAG CATCAAAGGA TTAAGGCTGT ATTGCTCCGC TCAGAATATC
TATACCTGGA CCAAATATCA GGGCTATGAT CCAGAAGTTT CCGCTTACGA TTCGGCACTT
ACACCGGGCT TCGACTGGTC GGTATACCCC CGCGCAAGAA CATTAACATT CGGTCTTAAC
CTTACTTTAT AA
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| Protein sequence | MKFYKLLKHT AAYASLAGLS GSGSSPVKLN QANKTKWVMR IKLTCFLLLL GLIQVSAASF
AQKVSLSLKN VTLANVLSNI KQQTGYNFLY NLDMLSKLPH IDIEVQNQQL TAVLEKCFAN
QPLTFVIEEN TVIIKPKTAD GRILAVEIKG RVTDPNGQPL PGVSVKLKGS NIGITTGSTG
HYLIKVPDAN GTLLFSYVGF VPLELNINGK TELNVILKEE QTRLDEVLVV GYGEVSRKDL
TGSVGSVNMA DIQKAPVRSF DEALAGRVAG VQVTSVDGQP GSNINIVIRG ANSITGTNAP
LYVIDGFPLE DSDNNAINPD DIESIEVLKD ASATAIYGAR GANGVIIITT KTGKEGTSSI
TYNGYYGQQE VLERMELFDS YEFVKYQSER YPGTVSDLYF NSSRPNLESY RLVPAADWQS
KLFRVAPMQN HSLAVLGGTG KTKYSISGNI LNQDGVMVSS GYNRYQGRFR LDQKVNDKLT
VSGNVNYSAL KKFGGSPVPE SGSFQSSALM YSVWGYRPVV GNPNIDIEEE SIDQDIDLVN
DKRFNPLQNY QNQLREQYTN ILNANAYAEY KWNAFKLKVS GGVTRSARRS DSFDNSLTGS
GSPLTPQGIA NGVNGGVSYL ETNNYLNENT LSYSKTFAKR HKVSAVAGFT IQGRSSNGFG
AYATLVPNEL LGVSGLDEGS PKSISSNSTS NTLASFLGRI NYSYRSRYLA TLSFRADGSS
KFAPGNKWGY FPSGALSWRI SEEEFMKSLK FISDAKLRAS IGATGNNRVS DFAYMSTLNL
PNSAIYAFNN ASVKGLIPTA LGNINLIWET TVQSDLGLDL SLFKNRAILT VDLYRKTTKD
LLLNANLPPS LGFARSYKNV GRVRNDGLEV SLETTNISNS KFTWSSQFNI SFNRNKVLEL
TENQEALVSM INWETSYKSL PPYIAKIGQP IGMFYGLIWE GNYQYADFDQ LPSGKYILKS
EIPTNGNPRE DIQPGDIKYK DLNGDGVADL SDYTIIGNPN PNFNFGFSNN FAYKGFDLGV
FLQGAYGVDI MNTNRLVFEG FGRASQNMFA TYINRWTPEN QNNTYYRTLG YGPAAYSSRV
VEDGSYLRLK TVSLGYKFPS KLLNKYSIKG LRLYCSAQNI YTWTKYQGYD PEVSAYDSAL
TPGFDWSVYP RARTLTFGLN LTL
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