Gene Phep_1429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1429 
Symbol 
ID8252529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1697658 
End bp1698761 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content39% 
IMG OID644935082 
Productpermease YjgP/YjgQ family protein 
Protein accessionYP_003091705 
Protein GI255531333 
COG category[R] General function prediction only 
COG ID[COG0795] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.398459 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.880258 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTTA TCAAGGACAG GGTCAAAATT CTCGACTGGT ATATCATCAG CAAATATCTG 
GGCACGTTTT TATATACGCT TACCTTATTT GTAGTGATCA TCATTATTTT TGACCTGTCG
GAGAAACTGG ATGATTTTTT AAGTGCCAAC CTTACCTTCT GGCAGGTCAT ATCACTTTAT
TACGCCGGCT CTATCCCTTA TTATGTAAAT ATGCTGTCGC CGCTGATCAA TTTTATAGCG
GTTATATTTT TTACTGCAAA AATGGCCGAC CAAACTGAAA TTGTGCCTAT TTTAAGTGGG
GGAGTAAGCT TTAACCGTTT TCTTCTTCCC TATTTTGTAT CTGCATTTGT CATTTTTGCG
GTTAACCTGG CTTCCAACTT ATACATCCTG CCCTATACCA ATCAGCTCAA AAACACTTTC
GAGAATACCT ACGTAAAGAA AAATGATCCA TCCAGCAAAA GCAATATCCA TATGAAGCTG
GACGACAACA CCTATATCTT TATGGATAAT TTCGACAATA AGAGCAAAAC AGGTACAAAA
TTCTCATTAG ACAACTTTAA AGGGGATGTG CTGACCAAGA AGCTTATTGC AGACGAAATC
AAATGGGACT CCTTAAAACG ATCATGGAAG CTAACAAACT ATTCTATAAG ATATGTGAAC
GGCTTAAAGG AAACTTTTGT AAGCGGTACT TCCCTTACAA AAGACACGGT ACTTGACATG
CGGCCGGACG ACTTCTCTGC TTACGACAAT GTCTTTGAAA ATTTAAGCAA TAAAGAACTC
TCTGAAAAGA TCAGAAAAGA AAGAATCAGG GGCTCCGGTA TCTGGAACGA CCTCTTATTT
GAGCAATACA AACGCTATTT ACACCCTTTG TCGGCTTTTG TTTTAACCCT TATAGGTGTC
GCATTATCCT CCAGAAAGGT GCGTGGAGGG GTTGGACTGC CCTTAGGTAT CGGAATTTTA
TTAAGTTTTG CTTACATTGT ATTTAACCAA TTCGCAAAAA TGTTTTCTCT TAAAGGCGGC
ATGCCTCCGT TACTGGCTGT AATTGCACCC ACTTTATTTT TTGGTTTACT GGGCTTTTAT
CTGCTCAGAA AGGCCCCCAA ATAA
 
Protein sequence
MNFIKDRVKI LDWYIISKYL GTFLYTLTLF VVIIIIFDLS EKLDDFLSAN LTFWQVISLY 
YAGSIPYYVN MLSPLINFIA VIFFTAKMAD QTEIVPILSG GVSFNRFLLP YFVSAFVIFA
VNLASNLYIL PYTNQLKNTF ENTYVKKNDP SSKSNIHMKL DDNTYIFMDN FDNKSKTGTK
FSLDNFKGDV LTKKLIADEI KWDSLKRSWK LTNYSIRYVN GLKETFVSGT SLTKDTVLDM
RPDDFSAYDN VFENLSNKEL SEKIRKERIR GSGIWNDLLF EQYKRYLHPL SAFVLTLIGV
ALSSRKVRGG VGLPLGIGIL LSFAYIVFNQ FAKMFSLKGG MPPLLAVIAP TLFFGLLGFY
LLRKAPK