| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1424 |
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| Symbol | |
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| ID | 8252524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1691251 |
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| End bp | 1692054 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644935077 |
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| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
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| Protein accession | YP_003091700 |
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| Protein GI | 255531328 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.950669 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGCAT TTGCCAATGC CAAAATAAAC CTTGGCCTAA ACGTTACCCG AAAAAGACCT
GATGGTTATC ATGATATCGA AACGGTCTTT TATCCTGTAA AGCTGAATGA TGTTGTTGAG
ATTACTGATT CCGAAAACAC CATATGTCTT GTAAAAGGGA TAGATGTGCC CGGAGATACG
CGGGATAACC TATGTTTGAA GGCCTTTAAT TTGTTAAAAA AGGATTTTGA TTTGCCGGCA
CAGCAAATTA CTTTGCTGAA GAATATTCCG GTGGGCGCTG GTCTTGGTGG GGGTTCTTCA
GATGCAGCAC AGCTGATCAG ACTGGTAAAT GACAAATTTA AACTGGGCCT ATCTGTAGTA
AAAATGCAAA ACTATGCCCG GGAACTGGGT GCAGACTGCG CTTTCTTTAT AGAGAACCGA
CCTGTTTATG CTTTTGGAAA GGGGGATGAA TTTCAGCCAA TCGCAATAGA TTTGTCAAAT
TATTATGTGG TACTGGTAAA ACCGCCTGTT CATGTCTCTA CGGCAGCGGC TTATGCGGGA
ATTAAGCCTG TAATTCCTAG CAGATCGGTA AAAGATTTAA TACATTTGCC CTTGAAAACA
TGGAAACAGC ATCTTGAAAA TGATTTTGAA TCCACTGTGT TTTCGAAATA CCCGGAAATT
GAACTGGTCA AAAAAAAACT TTACCAATCG GGTGCCCTCT TTGCTTTAAT GAGTGGAAGC
GGGGCCAGTG TTTTTGCAAT TTTTGAGCAT GAAGTCAGTT TGCCGGAACT GGAAAATGGG
AATAAAGTGT TTTACAACAT TTAA
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| Protein sequence | MLAFANAKIN LGLNVTRKRP DGYHDIETVF YPVKLNDVVE ITDSENTICL VKGIDVPGDT
RDNLCLKAFN LLKKDFDLPA QQITLLKNIP VGAGLGGGSS DAAQLIRLVN DKFKLGLSVV
KMQNYARELG ADCAFFIENR PVYAFGKGDE FQPIAIDLSN YYVVLVKPPV HVSTAAAYAG
IKPVIPSRSV KDLIHLPLKT WKQHLENDFE STVFSKYPEI ELVKKKLYQS GALFALMSGS
GASVFAIFEH EVSLPELENG NKVFYNI
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