Gene Phep_1403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1403 
Symbol 
ID8252503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1672486 
End bp1672815 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content38% 
IMG OID644935056 
Productpreprotein translocase, YajC subunit 
Protein accessionYP_003091679 
Protein GI255531307 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0149317 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATATCAA CAATAATTTT GCAGGCTCAG GGAAACGGAA TGTTAAGCAC CTTAGTGCCT 
ATGGTTTTAA TCATGGTTGT ATTTTATTTC TTCATGATCA GGCCACAGGT TAAAAAAGCA
AAAGACCTGA AAAAAATGGT TGAAGCCTTA AAAAAGGGAG ATAAAATTGT GACCACTGCA
GGTATTCACG GCCGTATAGC CGATATGAAC GAAACTACTT TTCTAATTGA AGTAGAAGGT
GGCACCAAAA TCCGTTTTGA TAAAACAGCA GTATCCTTAG ATGCAACTAA AGCCGTTGCA
CCTAAAACTG AAGAAACAAC CAAAGCATAG
 
Protein sequence
MISTIILQAQ GNGMLSTLVP MVLIMVVFYF FMIRPQVKKA KDLKKMVEAL KKGDKIVTTA 
GIHGRIADMN ETTFLIEVEG GTKIRFDKTA VSLDATKAVA PKTEETTKA