Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1390 |
Symbol | |
ID | 8252490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 1656124 |
End bp | 1658688 |
Gene Length | 2565 bp |
Protein Length | 854 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644935043 |
Product | Peptidase M1 membrane alanine aminopeptidase |
Protein accession | YP_003091666 |
Protein GI | 255531294 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0308] Aminopeptidase N |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.187392 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAGTC CTCGTCATAT ATTATTAGGG ATTATTTTTG TTTTCTTCCT GTGTTCTGCC TCAAAAATTG CCACAGGGCA GGAAATAGAA ACGGGGGTTT CTAAGGAGCT GGCCCTATAT AGGAAAACAG TGCTTGACAA GATCAGTTAT ATCCTCGAAT TCGACATTCC AAAGGAAAGA ACCGGGAATA TTGCTGCAAC TGAGCTGCTG AGCTTTCATC TGAGTGCCAA CGACCAGACT TTACAGCTGG ATTTCAAAGA AGCATCATCA AAAGTCAGGA AGCTGATTGT AAACGGTCAG AACATTCCAA TACAGCATGA AAAAGAACAT TTACTGATTG CTGCAAAGTA TCTGAAAAAA GGAAGCAATC AGGTTAAAAT AGAATTCCAG TCAGGAGAGG CCGCATTAAA CCGTAATGCC GATTACTTAT ATACTTTGTT CGTACCTGAT CGGGCCAGAA CAGTTTTTCC CTGCTTTGAT CAGCCTGATC TTAAAGCAAC CTATAACCTG ACTTTGAAAG TGCCGGCCGA CTGGAAAGCC ATTTCCAGCG CACCTTTAAA AGAAGCTATA ATTTTAAATG GGCGTAAGAC CTGTCAATTT GTAACATCTG ATACTTTAAG TACCTATCTC TTTTCTTTTG TAGCCGGTAA GTTTGAACAG CAATCCGGAA ACATTGGTAA GGGAAAAACA GAGTTTTTAT ACCGTGAAAC AGATACTGCA AAGATAACGC ACAGTATGAA GGAGCTTTTT AAGCTCCATA AGGATGCCAT GAGTTATTTG GAAGACTGGA CAGCGATTCC TTATCCCTTT CAAAAGCTTG ATTTTGCAGC CATACCCGAC TTTCAGTTTG GGGGGATGGA GCATGTAGGG GCCATACAAT ATAAAGCCGC AGCTTTATTC TTAGACAGTA CGGCTACAAA AGATCAGCTG AATTCAAGAA ACAACCTGAT TGCCCATGAA ACGGCACATA TGTGGTTTGG TGATCTGGTA ACCATGACCT GGTTTACAGA TGTCTGGATG AAAGAAGTGT TTGCCAATTT TATGGCAGAT AAAAGTGCAG AAGGAAATGT AGGTAAGGCC GTTTTTGACC TGAAATTTTT AATAGACCAT TTTCCGGCGG CTTATGGTGT AGACCGTACT GCCGGCTCAA ATCCAATTCG TCAGCAGTTG GATAACCTGA AGGATGCCGG TACAATGTAT GGTAATATCA TTTACCATAA GGCGCCGATT ATGATGCAAC AGCTGGAACT GTTAATGGGA AAAGATAAAT TTCGGCAGGG AGTAAGGGCG TATCTTAAAA AGTTTGCCAA CAGCAATGCT TCGTGGCCCG ACCTGATTGG TATGCTGAAT AAATATTCGG ATCAGGATTT AGAAGGATGG AATAAGGTAT GGGTAAATGA GCCGGGCAGA CCTGTTGTAG ATTATACCAT TGAGAAAAAA GGAGATAAAA TCGGCAGGTT TACGATTAAA CAGGTAGCTG AATATGGCAG GCAAAGAATC TGGCCCCAGC TTTTTGAACT CACATTTTAT TATCAAGGTT ATACCAGGAA AATACCGGTT AATTTAAATG CAGCGCAAAT TGAATTAAAA GAAGCGGAAG GATTGGATGT GCCGTTATTT GTATTGTTCA ACTCATCAGG TCAGGGTTAT GGATTATGGC CCCTGGATAT GGATATGTTC AATCATCTGT ATGACATGGA AAAACCTGTA AACCGCGCCA CTGCTTACAT TACCCTTTAT GAGAATATGC TGGATGACAG GTATATTAAG CCGGCAGCGT TGTTGACCCT TTTTGTGGAA GGCCTGACTA AAGAAAAAGA AGAATTAAAC CTGAATCTGA TTACTGGTTA TATGGGTACG GTTTACTGGG AATTTCTTTC AGAACAGGAA AGGAATAAGC TTACAGAGTT ATTGGAAAAG AAAATATGGG AGGCCATGCT TGAACAGCAA GGCCCTAACC TTAAAAAGCT TTTGTTCAAA ACTTACCAGA ATATATTTTT AAGCAAAGCT GCTGCCAGCC GGCTGTATGA AATATGGAAA GTTCAAAAGG CCCCCGCCGG AGTAAAGCTA TCGGAAGATG ATTATACTTC ATTGGCTTTT TCGCTGGCTT TAAGAGCTGG TGCAGACGCT GCTGTATTAA AAACGCAATT GCTGCGTATA AGTAATGCCG ACAGAAAGAA AAGATTTGAG TTTATCATGC CTGCACTTTC TGCTGATGTA ACTGAACGTG ACCGGTTTTT TAAGAGCTTG GAATTAAAAG CAAACAGAGA AAAAGAAGCT AACGTTACTG CGGCATTATA TTACCTGCAT CATCCTTTAA GGCAATCCGG GTCTGTAAAA TATCTGGATA AAAGTCTGCA AATGCTGGAG GAGATCCAGA CAACCGGTGA CATCTTTTTT CCTCAAAATT GGCTGACAGC TACTTTTAGC TATTATCAAA GTCCAGAAGC CGCCAGGATA GTCAGCCATT TTTTTAATAC ACACCCGGAT TACCACCCTC AACTGAAAGC CAAACTTCTC CAAGCTACGG ATAACCTGTT CAGGGCTCAA AAACTATTAA AATAA
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Protein sequence | MISPRHILLG IIFVFFLCSA SKIATGQEIE TGVSKELALY RKTVLDKISY ILEFDIPKER TGNIAATELL SFHLSANDQT LQLDFKEASS KVRKLIVNGQ NIPIQHEKEH LLIAAKYLKK GSNQVKIEFQ SGEAALNRNA DYLYTLFVPD RARTVFPCFD QPDLKATYNL TLKVPADWKA ISSAPLKEAI ILNGRKTCQF VTSDTLSTYL FSFVAGKFEQ QSGNIGKGKT EFLYRETDTA KITHSMKELF KLHKDAMSYL EDWTAIPYPF QKLDFAAIPD FQFGGMEHVG AIQYKAAALF LDSTATKDQL NSRNNLIAHE TAHMWFGDLV TMTWFTDVWM KEVFANFMAD KSAEGNVGKA VFDLKFLIDH FPAAYGVDRT AGSNPIRQQL DNLKDAGTMY GNIIYHKAPI MMQQLELLMG KDKFRQGVRA YLKKFANSNA SWPDLIGMLN KYSDQDLEGW NKVWVNEPGR PVVDYTIEKK GDKIGRFTIK QVAEYGRQRI WPQLFELTFY YQGYTRKIPV NLNAAQIELK EAEGLDVPLF VLFNSSGQGY GLWPLDMDMF NHLYDMEKPV NRATAYITLY ENMLDDRYIK PAALLTLFVE GLTKEKEELN LNLITGYMGT VYWEFLSEQE RNKLTELLEK KIWEAMLEQQ GPNLKKLLFK TYQNIFLSKA AASRLYEIWK VQKAPAGVKL SEDDYTSLAF SLALRAGADA AVLKTQLLRI SNADRKKRFE FIMPALSADV TERDRFFKSL ELKANREKEA NVTAALYYLH HPLRQSGSVK YLDKSLQMLE EIQTTGDIFF PQNWLTATFS YYQSPEAARI VSHFFNTHPD YHPQLKAKLL QATDNLFRAQ KLLK
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