| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1373 |
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| Symbol | |
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| ID | 8252473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1633318 |
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| End bp | 1634178 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644935026 |
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| Product | RNA polymerase sigma factor, sigma-70 family |
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| Protein accession | YP_003091649 |
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| Protein GI | 255531277 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.212726 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACAAT TAAAGATAGA GCAGTCCATT ACCAACCGGG ATTCGGACTC GATAGAAAAA
TACTTGTATG ACATTGCAAG AATTGACTTA CTAAGCGTTG AAGAAGAGAT TGTGCTTGCC
CAGAAGATCA GGAAGGGAGA CCAGTCGGCA TTAGACCGCC TGGTAAAAGC CAACCTGCGC
TTTGTAGTAT CTGTGGCCAA GAAATATCAG AACCAGGGCA TCCGTTTGTC CGACTTGATT
GCAGAAGGAA ACCTGGGGCT GATTAAAGCT GCCCAAAGGT TTGATGAAAC TAAAGGCTTT
AAATTCATCT CCTTTGCCGT CTGGTGGATC CGTCAGAGTA TTATGATCGC AATTGCCGAA
CAGAAACGTA TCGTCCGTCT GCCTGCAAAC CAGATCGGTG GAATCATGAA GATCAACAAG
GCTATGGCTG ACCTGGAACA ACAGCTGGAA CGGGTACCCA GTTTGGAAGA AGTTTGTGAA
TTTATTGAAC TGCCGGAAGA AAAGGTGGTC GATTATCTGC ACCACGCCCC CATGACAACT
TCCCTGGATA CAGTAATAGC AGAAGAATCT GGTTTTACCC TTGCCGAAAC CATAGAGGAT
ACCAATGTAG AAAAAACAGA TACTACGGTA TTGCAGCACT CTGTTACTGT AGATGTGAAG
CGACTAATGA GAGGACTGCC GGAACGCGAA AAAGAAATCC TGTCCATGTT TTATGGTTTG
GGTGGCTATC CGGCCATTGG CCTGGATGAA ATTGGCGGTA AGATGAACCT CGGTAAAGAA
CGGGTAAGGC AGATTAAAGA CAAAGCCCTG AAAACATTAA GATCGGAACA ACCAAAAGCA
TACATGATGG AATATATCTG A
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| Protein sequence | MRQLKIEQSI TNRDSDSIEK YLYDIARIDL LSVEEEIVLA QKIRKGDQSA LDRLVKANLR
FVVSVAKKYQ NQGIRLSDLI AEGNLGLIKA AQRFDETKGF KFISFAVWWI RQSIMIAIAE
QKRIVRLPAN QIGGIMKINK AMADLEQQLE RVPSLEEVCE FIELPEEKVV DYLHHAPMTT
SLDTVIAEES GFTLAETIED TNVEKTDTTV LQHSVTVDVK RLMRGLPERE KEILSMFYGL
GGYPAIGLDE IGGKMNLGKE RVRQIKDKAL KTLRSEQPKA YMMEYI
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