| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1346 |
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| Symbol | |
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| ID | 8252446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1604243 |
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| End bp | 1605148 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644935000 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003091623 |
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| Protein GI | 255531251 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAAT CACGCCGCAG TTTTCTGACC CAAATCGGTC TTTTATCAGC CAGTCCATTA
CTCGCATCCT CTGATTTACT GGCCTCAACA TTGCCTGCTC CGGCAATTCA ATATGGGTAT
GCCGCAATTA CCTGGGGCAA TGATATCAAA CAATCCATTC TTGACATTTC TTCACTTGGA
TTTAAGGGAA TTCAGCTGAG GGCAAATGCC TTTACAGAAT TTGGACAGAA ACCTGAAGAA
TTGATCCAGC TGCTGAAAGC GGCAAAACTG AAGCTGGCCA TGTATTCGAG TGGCAATGCC
AACATCAATA CCGGAAACGA TGAGGCCGAA ATTGCCAAGC ATGTTGAAAG TGCCCGTTTT
GTAAAAATTT TAGGGGGCAG CAGCATTCAG CTGACCAATT CATCAAGACC TAAAACTGGT
GAGGTAAGCA ATGAAGACCT TGTAAAATAC GCTAAACTAT TAAATGAGAT CGGCAAACGC
ACTGCTGCTA TTGGCATAAA AACAACTTAT CATAACCACA TGGGGCAACT GGGACAAACC
CCTGAAGAAG TGGACGTGAT CTTAAAGCAT ACAGATCCGA AATTAGTGAA GCTTTTGCTG
GATATCGGTC ATTATCAGCA AGGTGGCGGA GACCCTGTAA CGGCCATAAA AAAATACAAG
GACCGTTTGG AATGCCTGCA CATTAAAGAC GTAAAAGATA CCAGCGACGC CAAAGGTTTT
ATATTTGTAG AGCTTGGGCA GGGGCGTGTT GATCTGCCTG CGGTATTTGC GGCCTTAAAA
GCAATTAATT ACAGTAAATA TGCTATTGTT GAACTGGATG CAGTTCCGGT AAAAGGCCGC
ACGCCCCTGG AAAGTGGCCA GATTACCCGC GATTATTTAA TCAATAAACT CGGGATCACT
ATTTAA
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| Protein sequence | MKQSRRSFLT QIGLLSASPL LASSDLLAST LPAPAIQYGY AAITWGNDIK QSILDISSLG
FKGIQLRANA FTEFGQKPEE LIQLLKAAKL KLAMYSSGNA NINTGNDEAE IAKHVESARF
VKILGGSSIQ LTNSSRPKTG EVSNEDLVKY AKLLNEIGKR TAAIGIKTTY HNHMGQLGQT
PEEVDVILKH TDPKLVKLLL DIGHYQQGGG DPVTAIKKYK DRLECLHIKD VKDTSDAKGF
IFVELGQGRV DLPAVFAALK AINYSKYAIV ELDAVPVKGR TPLESGQITR DYLINKLGIT
I
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