| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1332 |
|---|
| Symbol | |
|---|
| ID | 8252432 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 1586393 |
|---|
| End bp | 1587067 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644934986 |
|---|
| Product | response regulator receiver |
|---|
| Protein accession | YP_003091609 |
|---|
| Protein GI | 255531237 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTAT TATTGGTAGA AGATGAACCT GTGCTGGTTG AAGAAATGGA GCAGTACTTC
AGGTCACATG GCTTTTCCTG CGACCAGGCA GTGAGTTTTT CGCAGGCCGA GGACAAAATA
TTGAACAGCC GTTATGATGT AGTGGTGCTT GACATTACCT TACCAGATGG TACAGGTATG
GACCTGATTG CCGACATCAG GCAACGGGAC GCCGAAACGG GCATCGTGAT CCTGTCGGCC
CGGAATTCCC TGTCGGATAA GCTGGAGGGA CTTGATCTGG GGGCCGATGA TTACCTGACC
AAACCTTTTT TCCTGGAAGA ACTGAGTGCC AGGATCAATG CCCTTTACCG CCGCAAAACC
CTCAGGGGTA CAGTCGAGAT CCTTTTTGAT GATTTTACCA TTGAACCCCT GGCTAAACTG
TTCTTTTATC TTGGTGAGCC AGTTTCGTTA ACTAAAAAAG AATTTGAAAT GCTGGTTTAC
TTTGTGGTAA ACAAAAACCG TGTATTGAGC AAAGCGTCCA TTTCCGAGCA TCTGTGGGGC
GATCATTTCG ATCAGCACGT AAATTTCGAT ACGCTTTATA TGCACCTCAC CAATCTGCGA
AAAAAATTAA CCCGGCTATC GGGTAAACAC TATATCAAAA CGGTTTATGG GATTGGCTAT
AAATTTACCT GCTGA
|
|---|
| Protein sequence | MKLLLVEDEP VLVEEMEQYF RSHGFSCDQA VSFSQAEDKI LNSRYDVVVL DITLPDGTGM
DLIADIRQRD AETGIVILSA RNSLSDKLEG LDLGADDYLT KPFFLEELSA RINALYRRKT
LRGTVEILFD DFTIEPLAKL FFYLGEPVSL TKKEFEMLVY FVVNKNRVLS KASISEHLWG
DHFDQHVNFD TLYMHLTNLR KKLTRLSGKH YIKTVYGIGY KFTC
|
|---|
| |