| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1320 |
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| Symbol | |
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| ID | 8252420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1574963 |
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| End bp | 1576057 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644934974 |
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| Product | GTP-binding protein YchF |
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| Protein accession | YP_003091597 |
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| Protein GI | 255531225 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0012] Predicted GTPase, probable translation factor |
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| TIGRFAM ID | [TIGR00092] GTP-binding protein YchF |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTAC AATGTGGTAT AGTTGGTTTA CCAAATGTTG GAAAATCTAC ATTATTTAAC
TGTTTATCTA ACGCAAAAGC TCAGGCAGCT AATTTCCCTT TTTGCACTAT CGAGCCCAAT
ATAGGGGTAA TTACCGTACC GGACGAAAGG TTAACGAAAT TAGCAGAATT GGTTAAGCCA
AACCGCGTTG TTCCAAATAC CATCGAAATC GTAGATATCG CCGGTCTGGT TAAAGGTGCA
TCCAAAGGAG AAGGCCTTGG CAACCAGTTT CTTGGCAACA TCAGGGCTAC CAATGCCATC
ATTCACGTAC TGCGTTGTTT TGATGACGGA AATGTAATCC ACGTAGATGG TTCTGTTGAT
CCCATCCGCG ACAAAGAAAT CATTGATACT GAATTACAGC TTAAAGATCT GGATACAGTG
GTCAAACGCA TCCAAAAGGT AGAGAAAATG GCAAAGACCG ACAAGGATGC CAAAAGAACA
TTCGATATAC TCAGCCTGAT CAAAACCCAT CTTGAAAGTG GTAAATCTGT GCGCTCAGCA
GCTGTATCTG CTGAAGATTT TGATTATATA CAAGACCTGG GTTTGCTTAC ACAAAAACCT
GTAATGTACG TTTGTAATGT AGATGAAGGT TCTGTAATTA ACGGCAATGC TTATGTAGAC
CGTGTTAAAG AAGCCGTAAA AGACGAGAAT GCTGAAGTAT TGGTGATATC CGCCAAAATA
GAATCAGAAA TTGCTGAGCT GGACAGTTAT GAAGAACGTC AGGAATTCCT TGCCGATCTT
GGCCTGACTG AGTCTGGAGT AAACAAGCTG ATCGTGGCCG CTTACCGTTT GCTTGACTTA
TATACTTATT TCACAGCAGG TGTACAGGAA GTGAGGGCCT GGACCATCAC CAAAGGCTTT
ACTGCCCCTC AGGCTGCCGG TGTGATCCAT ACAGATTTTG AAAAAGGGTT TATCCGCGCT
GAAGTAATTA AATACAACGA CTTTGTAACC TTAGGTTCTG AAAATGCATG TAAGGATGCA
GGCAAGCTGG GTGTTGAAGG GAAGACTTAT GTAGTGGAGG ACGGGGACAT CATGCACTTC
AGGTTTAACG TTTAG
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| Protein sequence | MALQCGIVGL PNVGKSTLFN CLSNAKAQAA NFPFCTIEPN IGVITVPDER LTKLAELVKP
NRVVPNTIEI VDIAGLVKGA SKGEGLGNQF LGNIRATNAI IHVLRCFDDG NVIHVDGSVD
PIRDKEIIDT ELQLKDLDTV VKRIQKVEKM AKTDKDAKRT FDILSLIKTH LESGKSVRSA
AVSAEDFDYI QDLGLLTQKP VMYVCNVDEG SVINGNAYVD RVKEAVKDEN AEVLVISAKI
ESEIAELDSY EERQEFLADL GLTESGVNKL IVAAYRLLDL YTYFTAGVQE VRAWTITKGF
TAPQAAGVIH TDFEKGFIRA EVIKYNDFVT LGSENACKDA GKLGVEGKTY VVEDGDIMHF
RFNV
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