Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1265 |
Symbol | |
ID | 8252363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 1495827 |
End bp | 1497743 |
Gene Length | 1917 bp |
Protein Length | 638 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644934918 |
Product | ABC transporter related |
Protein accession | YP_003091543 |
Protein GI | 255531171 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.870161 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTCAA TAAACGACTT AACATTCCTG CTGGGCTCCA GGGCATTATA CGACGAAGCA GACTGGCACA TTAAACCGGG AGAGAGAATT GGACTGATTG GTGCCAATGG AACAGGAAAA TCTACACTAT TAAAAATAAT TGTTGGCGAA TATGCACCTT CTTCGGGAAC GATTTCTATG TCGAAAGACC TCAAGATCGG CTACCTCAAC CAGGATCTGC TTTCTTATGA TTCGCATCAT AGCATTTTAC ATGTAGCAAT GGAGGCTTTT GAACGCCAAA ACCAGCTACA TGATGAGATT GAAGCACTTT TAAAAAAAAT TGAGACTGAT TATTCTGAAG AAGTTTTAAA TAAACTGAGC GACAAGCAAC AGGAGTTTGA AGCACTTGAT GGCTATAACA TTGAATACCG TGCCAACGAA ATCCTCGCAG GTCTTGGTTT TAGTACCCAG GATCAGCACA GACCCTTGAA TACCTTTTCG GGGGGTTGGC GGATGCGCGT AATGCTGGCC AAGATCCTGC TGCAAACACC AGATATCCTG TTACTGGATG AACCTACCAA CCACATGGAT TTACCTTCCA TTAAGTGGCT GGAAACTTAT TTATTAAGCT TTGAAGGTGC CATAGTTATC GTTTCGCACG ATAGATATTT CCTGGATAAA GTGGTCAATA AAATTGTAGA GTCACGCAAG GGTAAACTGA CACCTTATGC AGGTAATTAT ACATTTTACC TTGAAGAGAA AGCTTTAAGG GGCGAGATCC AGAAAGGTGA ATTTAAAAAC CAGCAGGCCA AAATCAAACA GGAAGAACGG CTGATCGAGC GCTTCAGGGC TAAAGCTTCC AAAGCTAAAA TGGCACAGTC GCGTATGAAA GCACTGGACA AGCTGGAACG TGTAGAGGAT GTAGACGATG ATAATCCTAC AGTTAACTTC CAGTTTAAAT TTTCTAAACC TTCAGGTCGT CATGTTGTCC GCATTGAAAA TGCCACCAAA AGCTATCCTA ACGTAGAAAT TCTGGAAAAT GCTGAAGGGG TAATCGAAAA AGGTGATAAA ATTGCCCTGA TCGGCGCCAA TGGTAAGGGA AAATCTACTT TATTAAGGAT CATTGCCGGC ACAGAGAAAT TTGATGGGAA ATGCGAAACC GGTCATAACG TTACCACTAC CTTTTTTGCA CAGCACCAGC TGGAATCGCT GCACCTGGAC AATACCATTT TAGAAGAACT GCAGGCTTTT GCACCTAAAC ATACCGACAC AGAACTACGT GGCATATTAG GCTGTTTTCT ATTTACCGGT GATGATGTTT TCAAAAAGAT CAGGGTACTT TCCGGAGGAG AGAAATCGAG GGTAGCATTG GCAAAATCAC TGACGACGGA TTCTAACTTC CTGATTCTGG ATGAGCCTAC CAACCACCTG GACATCCAGT CTGTAAATAT CCTGATCCAG GCGCTGCAGC AGTATGAAGG TACTTTTATT GCCGTTTCCC ACGACAGGTA CTTCCTGGAT AATGTGGCCA ATAAGATCTG GTTCATAGAA GAGAAGAACA TTAAAGAATA TCCTGGAACC TATGCCGAAT ATGAAGAGTG GAATGCCAAA AGGCCGCAAC CTGTTGCTAC CCCAATACCT GTAAAACAGG AAAAGGAAGT AAAACCTAAA GCGGAGGAGA AACCAGTTTC TTTAAATGCA CAGCAGCAGC TTAAAAAACT AAACGACCAA CTGCAAAAAA CAGAAAAGGA AATTACTGCT TTTGAGCAAA GTGTAAAAAC CATAGAAGCT AAAATAGCCG ACGAGGAAAC CTATTCAAAT GCGAATAAGT TAGCAGAGGC CAATGCAGCA TATACCACGG CCAAGTTTTT GCTGGACACC GCACAAAATA CATGGGAAGA ATTGGCTTCG CAGATTATGG AACTGGAAAG TAAATGA
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Protein sequence | MISINDLTFL LGSRALYDEA DWHIKPGERI GLIGANGTGK STLLKIIVGE YAPSSGTISM SKDLKIGYLN QDLLSYDSHH SILHVAMEAF ERQNQLHDEI EALLKKIETD YSEEVLNKLS DKQQEFEALD GYNIEYRANE ILAGLGFSTQ DQHRPLNTFS GGWRMRVMLA KILLQTPDIL LLDEPTNHMD LPSIKWLETY LLSFEGAIVI VSHDRYFLDK VVNKIVESRK GKLTPYAGNY TFYLEEKALR GEIQKGEFKN QQAKIKQEER LIERFRAKAS KAKMAQSRMK ALDKLERVED VDDDNPTVNF QFKFSKPSGR HVVRIENATK SYPNVEILEN AEGVIEKGDK IALIGANGKG KSTLLRIIAG TEKFDGKCET GHNVTTTFFA QHQLESLHLD NTILEELQAF APKHTDTELR GILGCFLFTG DDVFKKIRVL SGGEKSRVAL AKSLTTDSNF LILDEPTNHL DIQSVNILIQ ALQQYEGTFI AVSHDRYFLD NVANKIWFIE EKNIKEYPGT YAEYEEWNAK RPQPVATPIP VKQEKEVKPK AEEKPVSLNA QQQLKKLNDQ LQKTEKEITA FEQSVKTIEA KIADEETYSN ANKLAEANAA YTTAKFLLDT AQNTWEELAS QIMELESK
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