Gene Phep_1240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1240 
Symbol 
ID8252338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1459599 
End bp1460471 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content46% 
IMG OID644934893 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_003091518 
Protein GI255531146 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGAACA TCTTTATCGG TTTACTTTTT GCCATGCTGT GGGCATCAGC ATCTGTAGCA 
ACTAAATTCG GCATATTGTC ATCGCCCCCT TTAATCCTGG GCAACCTGCG TTTTTTTATC
GCAGGTTTTG TGCTGCTGGG CTTTTGTTAC CTGATCAGCA GGGACAAGCA ATACCGCCTG
CCTACGTATA CCGAATGGCG TCAGCTGGCC ATATTTGGCT TTCTGAACAC AACAGTATAC
CTTGGTTTGT ATGTATACGC CATGAAATAT ACTGCAGCAG GCATCGGCAG TTTGTCTACC
TCTACCAATC CCTTGCTCAT TGTGCTGCTT TCTTCCTGGT TGATGGGCCG CAGGCCGGCA
AAGGCAGAAA TCATCAGCAT CATCATTGGC ATGCTGGGCA TTGCACTGGC TACCTATCCC
CTGCTTAAAA ACAGCAATAC TACCATTTCA GGTGTAGCCA TACTCATGTT AAGCATGGTT
GCCGTTTCCT TTGCCAGTGT TTATTATGCA AGGATACAAT GGACCTTACC CAACCTGCTG
ATCAATGGCT GGCAGGTAAC CCTGGGTGGA TTATTCCTTT TACCCTTTAC CCTGGCATTT
AGCGATTTCT CTGCTTTAAA TTTCGACCAC AGGTTCATCT CTTCTGTATT GTGGCTTAGC
CTTTCCGTAT CTGTAGCCGG CCTCATCTGC TGGTTCTACC TCTTAAAAAT AGATACCGTA
AAAGCTTCCC TGTGGCTGTT CCTGTGTCCG CTTTTCGGTT TCTTTTATGC CTGGTGGCTG
CTCAATGAAC CCATTACACT GTATACAGTT TTCGGAACCT GCCTGGTTAT CGTTGGCTTA
TATATTGGTC AGCGCAAAAA GCTGAAAGCT TAA
 
Protein sequence
MKNIFIGLLF AMLWASASVA TKFGILSSPP LILGNLRFFI AGFVLLGFCY LISRDKQYRL 
PTYTEWRQLA IFGFLNTTVY LGLYVYAMKY TAAGIGSLST STNPLLIVLL SSWLMGRRPA
KAEIISIIIG MLGIALATYP LLKNSNTTIS GVAILMLSMV AVSFASVYYA RIQWTLPNLL
INGWQVTLGG LFLLPFTLAF SDFSALNFDH RFISSVLWLS LSVSVAGLIC WFYLLKIDTV
KASLWLFLCP LFGFFYAWWL LNEPITLYTV FGTCLVIVGL YIGQRKKLKA