| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1219 |
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| Symbol | |
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| ID | 8252317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1437991 |
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| End bp | 1439019 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644934873 |
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| Product | pseudouridine synthase, RluA family |
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| Protein accession | YP_003091498 |
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| Protein GI | 255531126 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAACA GTTATACCGG ACCGGAATTA GAAGAGCAGG ATTTATACGA ACACTTTAAT
ATTGTTGTTG ATAAAGGACA GTCTTTATTG CGGATAGACA AGTTTTTGAT GCACCGTATG
GAAAATGCGT CACGAAACCG CATACAGAAT GCAATAGAGG CAGGCAACGT ACTGGTCAAT
CAGAAAACGG TTAAAGCCAG TTATAAGGTT AAGCCTGCCG ACGAGATTTC TATCGTGTTT
CCCCATCCGC CACGTGATAC CGAAGTTTAT CCGGAAGACA TTCCTCTTGA CATTGTATAT
GAAGACAATG ACCTGCTGGT GGTTAATAAA CCTGCAGGTA TGGTAGTGCA TCCCGGATAT
AACAATTATA CAGGCACACT GGTCAATGCA CTTGCCTTCC ATTTTGAACA ACTGCCCCAG
CTGCCGGGCA ACGAGGGCCG TCCGGGCCTG GTGCACCGGA TTGACAAGGA TACCTCCGGA
TTGCTGTTGA TCAGCAAGAA TGAAATTACA ATGACCAGGC TGGCCAAACA GTTTTTTGAC
CATACCATTA CCCGTAAATA CGTGGCGCTT GCCTGGGGCG ATATCGAAAA AGATGGCACG
GTTACAGGCT ATATTGGTCG CAGCGCAAAA AACAGGATCG TGATGGATGT ATACGATGAT
GAAGAAAAAG GTAAGTGGTC TGTAACACAT TATGCCGTGT TGGAACGTTT AGGTTATGTA
ACCTTAATCA GCTGCCAGCT TGAAACTGGC CGTACACATC AAATCAGAGC GCATATGCAA
CATATTGGCC ACCCTTTGTT CAACGATGCC AACTACGGCG GTGATAAAAT TTTGAAAGGC
ACTACTTTTA ATAAGTACAA ACAATTTGTA CAAAACTGCT TTGAATTACT CCCCCGACAG
GCACTTCATG CACAAACACT AGGGTTTATT CATCCAGGTA CTAAAAAGTA TATGGAATTT
GAGGCACCTT TGCCTTCCGA TTTTGACTCG GCACTGAATA AATGGAGAAA TTATATCGTA
CAACCCTAA
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| Protein sequence | MENSYTGPEL EEQDLYEHFN IVVDKGQSLL RIDKFLMHRM ENASRNRIQN AIEAGNVLVN
QKTVKASYKV KPADEISIVF PHPPRDTEVY PEDIPLDIVY EDNDLLVVNK PAGMVVHPGY
NNYTGTLVNA LAFHFEQLPQ LPGNEGRPGL VHRIDKDTSG LLLISKNEIT MTRLAKQFFD
HTITRKYVAL AWGDIEKDGT VTGYIGRSAK NRIVMDVYDD EEKGKWSVTH YAVLERLGYV
TLISCQLETG RTHQIRAHMQ HIGHPLFNDA NYGGDKILKG TTFNKYKQFV QNCFELLPRQ
ALHAQTLGFI HPGTKKYMEF EAPLPSDFDS ALNKWRNYIV QP
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