| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1204 |
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| Symbol | |
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| ID | 8252302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1424949 |
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| End bp | 1427156 |
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| Gene Length | 2208 bp |
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| Protein Length | 735 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644934859 |
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| Product | RelA/SpoT family protein |
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| Protein accession | YP_003091484 |
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| Protein GI | 255531112 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.442977 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAATG CATTAGTTAT TGATTTAGAA GCAGAAAAGC AGGAGATACT GAAAAGATAC
CGTGCCCTTT TGCGTGCTTG TAAGCCAACA ATGCAAAGAG GGGATAAAAA GGAAATCAGG
AAGGCTTTTG ACATGGCATT GGAGAGCCAT AAAAACATGC GGAGAAAATC CGGGGAGCCT
TACATCTATC ATCCAATTGC TGTGGCCCAG ATTGCAGCAG AAGAAATTGG GCTGGGCACC
ACGTCCATAG TATGTGCGCT ATTGCACGAT GTGGTGGAAG ATACAGACAT TACGCTGGAG
GACATTGAGC GGGAGTTTGG TAAAAAGACA GCAAAAATTA TTGATGGGCT GACAAAGATC
TCGGGTGTTT TTGACTATAA CAGCTCTTTG CAGGCAGAGA ATTTTAGAAA AATGTTGCTG
ACCCTGGCAG ATGATGTAAG GGTAATCCTG ATTAAACTGG CCGACCGGCT GCACAACATG
CGTACCATGG ATTTTATGCC GAGGCAAAAA CAGCTTAAAA TTGCATCTGA AACCATTTAC
CTGTATGCAC CACTGGCGCA CCGTTTAGGA TTGTACGCCA TTAAGTCTGA GCTGGAAGAC
CTTTCCATGA AATACCTGGA ACCGGATACC TATAAGTACA TTGCCACTCA GCTGAACGAG
AAAAAAGCAG AACGGACACT GTTCATCAAA AGATTTGTGG AACCGATCAA CGAGATCCTG
GCAGAACAGG GCCTGACAGC TGATATCTAT GGCCGGCCAA AGTCCATCCA TTCCATCTGG
AACAAAATGA AAAGCAAAAA CATACCTTTT GAGGAAGTGT ATGACCTTTT TGCCATCAGG
ATTATTCTGG ACAGCCCGCC TGAAAATGAA AAAGCAGATT GCTGGAAAGC CTATTCGATT
GTGACCGACC TTTACCGGCC CAATCCCGAC CGTTTGCGCG ACTGGGTATC ATCGCCCAAA
GGAAACGGAT ATGAATCGTT ACATACCACA GTAATGGGCC CTAAAGGGCA ATGGGTTGAA
GTACAGATCC GTACGCAGCG CATGAACGAA ATTGCAGAGA AAGGCTTTGC TGCGCACTGG
AAATATAAAG AGTCGAGCAA CGACAACGGA CTGGATCAGT GGATCATGAA AGTAAGGGAA
ATGCTGAACA ACCCGGAAGC CAATGCTTTA GATTTTCTGG ACGATTTTAA AATGAACCTC
TTCTCGGATG AGATCTTTAT TTTTACACCC AAGGGCGCTT TGCTCCAGCT GCCATTGGGC
GCTACTGCGC TCGACTTTGC CTTTGAGATC CATACAGATG TAGGCGCAAA ATGTATCGGG
GCCAAGGTAA ACCATAAACT GGTGCCCCTG TCTTATAAAT TGCAGAACGG CGACCAGGTA
GAGATCATTA CCTCCAGCAA GCAATCCCCA AAAGAAGACT GGCTCAATAT CGTTGTTACT
GCCAAGGCAA AATCAAAGAT CAAATCTTCT TTAAAAGAAG AAAAGAGAAA AATTGCCGAA
CTGGGCAAGG AAACACTGGA ACGTAAGCTG AAATCATTAA AGATCACCTA CAACACCGAT
AATTTAAATA AACTCAGCTA CTTCTTTAAG CTGCCTTCTA CCCAGGAACT GTTTATTGCG
GTGGCAAAGG GAAAAATTGA ATTAAAAGAC CTGAAAGATT ACCTGGCCAG TGAAAAGGAA
ATAGAGAACC GTGGTGCCGA GAAAAATGAG CACCAGCAGA TAGATGCGCT GCTGAACAAG
GTAAAAGGAC CTGAATCGGA CATTTTACTG ATTGGCGAAG ACCTGCAAAA AATAGATTAT
ACACTGGCAG CCTGTTGTAA CCCAATTCCG GGTGATGATG TTTTTGGTTT TGTAACCGTT
AATGAAGGCA TAAAAATACA CCGCACCAAT TGCCCGAATG CGGCACAGCT GATGGCGAAC
TATGGTTATC GGGTGGTTAA AGCAAAATGG AACAGACAAA AAGAGCTTAC TTTCCTGACC
GGGCTGCACA TTATAGGTAT TGATGATGTG GGGCTGATCA ATAACATCAC CAAGGTGATC
TCGAACGATT TTAAGGTAAA TATGCGCTCT ATAACTGTAG ACACTGATAA TGGGATCTTC
GATGGCTCTA TCATGATCTT TGTAAACGAC AAGGACCACC TGGACAACCT GATTAAAAAT
CTGTTAGAAG TTAAAGGGGT AACGGGAGTT ACACGTTTTG ATGCCTAA
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| Protein sequence | MKNALVIDLE AEKQEILKRY RALLRACKPT MQRGDKKEIR KAFDMALESH KNMRRKSGEP
YIYHPIAVAQ IAAEEIGLGT TSIVCALLHD VVEDTDITLE DIEREFGKKT AKIIDGLTKI
SGVFDYNSSL QAENFRKMLL TLADDVRVIL IKLADRLHNM RTMDFMPRQK QLKIASETIY
LYAPLAHRLG LYAIKSELED LSMKYLEPDT YKYIATQLNE KKAERTLFIK RFVEPINEIL
AEQGLTADIY GRPKSIHSIW NKMKSKNIPF EEVYDLFAIR IILDSPPENE KADCWKAYSI
VTDLYRPNPD RLRDWVSSPK GNGYESLHTT VMGPKGQWVE VQIRTQRMNE IAEKGFAAHW
KYKESSNDNG LDQWIMKVRE MLNNPEANAL DFLDDFKMNL FSDEIFIFTP KGALLQLPLG
ATALDFAFEI HTDVGAKCIG AKVNHKLVPL SYKLQNGDQV EIITSSKQSP KEDWLNIVVT
AKAKSKIKSS LKEEKRKIAE LGKETLERKL KSLKITYNTD NLNKLSYFFK LPSTQELFIA
VAKGKIELKD LKDYLASEKE IENRGAEKNE HQQIDALLNK VKGPESDILL IGEDLQKIDY
TLAACCNPIP GDDVFGFVTV NEGIKIHRTN CPNAAQLMAN YGYRVVKAKW NRQKELTFLT
GLHIIGIDDV GLINNITKVI SNDFKVNMRS ITVDTDNGIF DGSIMIFVND KDHLDNLIKN
LLEVKGVTGV TRFDA
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