Gene Phep_1203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1203 
Symbol 
ID8252301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1424391 
End bp1424885 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content41% 
IMG OID644934858 
Productferric-uptake regulator 
Protein accessionYP_003091483 
Protein GI255531111 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.238976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.43174 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACAA ACCACAACAG CGAGTTGGTT AGAAAAATAT TCGAAGCCTA CCTCGAAAAT 
AAAAGTCTCA GAAAAACACC GGAGCGTTTT GCCATCTTAG AAGAAATTTA CTCAAGAGAT
GACCATTTCG ATGTAGAGAC CCTTTACATC CACATGAAAA ACCAGAAATA CCGTGTAAGC
AGGGCTACAG TATACAATAC TTTAGAGTTG CTGGTTTCAT GTGACCTGGT TACCAAACAC
CAGTTTGGTA AAAACATGGC CCAGTTTGAG AAATCTTACG GTTACCACCA GCACGACCAC
GTGATCTGTA TTGATTGCGG CAAAGTTGTG GAATTCTGCG ATCCGCGTAT CCAGCAAATC
CAGAGTATGG TAGGTGAACT GCTGAAATTT GACATCAAGC ACCACTCTTT AAATCTTTAT
GGCGTTTGTT TTGATTGCTC TGCAAAAGCA TCAATGAACA ATCAAACTGC CGCAGGTATT
AAGCATGCAA GTTAA
 
Protein sequence
MSTNHNSELV RKIFEAYLEN KSLRKTPERF AILEEIYSRD DHFDVETLYI HMKNQKYRVS 
RATVYNTLEL LVSCDLVTKH QFGKNMAQFE KSYGYHQHDH VICIDCGKVV EFCDPRIQQI
QSMVGELLKF DIKHHSLNLY GVCFDCSAKA SMNNQTAAGI KHAS