| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1182 |
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| Symbol | |
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| ID | 8252280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1401023 |
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| End bp | 1401997 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644934837 |
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| Product | helix-turn-helix- domain containing protein AraC type |
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| Protein accession | YP_003091462 |
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| Protein GI | 255531090 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.904069 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATACAAG TAGCTTTATT ATTGACCAAT AAATATCGTT TGTTAAGTGT AGCGGCTATA
TTGGATGTAT TTGATACTGT AAATAGTTAT TACGAGGCCG AGGGACAAGA GGCCCTGTTT
AATTTGAGCA TACTTTACGC TGCCAACAGC AACAATGAAG TACCTGTTTT TAACACGCAT
AAACCCCGAC CTTTAAATCC GGCAAACACA CAGGACCTGG TGCTGATCCC CGCCTTCGGT
ACGGCGGACA TGTCTGCCGC CATTCAGGAA AACCTTGAAT TCCTGCCCTG GTTAAAACAA
CAGCACCAAA AAGGTGTGGA ACTGGCCAGT TTTTGTACTG GTGCCTTTTT ATTGGCAGCC
AGCGGCCTCT TGGACGGCAA AAGTGCGACC ACACACATTC ATGCCAGTAC TTCCTTTGCT
TCCAGCTTTC CTGATGTATA TTTAAGGCCC AACGAGGTGG TTACCTACGA TCAGGGCATA
TATACAAGCG GGGGTGCCAC CAGTACTTTT CATTTATTGC TTAAGTTGAT ACATAATTAT
GCCAGCAGGG AAATTGCGGT GAGGACGGCC AAAGTGTTTG CAATAGACAT GAACCGGGAA
CAGCAAAGCT ATTTCGGTAC TTTTATCCCG ACCCGGGATC ATGGCGATGA GCTGGTGACT
AAAACCCAGT TGTGCATAGA AAATGCCTAT AATAAAGCAG CAACAGTTGA AGATATTTTG
CAGCATATTC CGGCAAGCCG CAGAAATATT GAACGCCGTT TTAAGCAGGC AACAGGAAAT
ACGCTGATCG CGTATTTACA GAAAACCCGG ATAGAAAAGG CTAAAAAGCT GCTGGAGCAA
ACCAATCAAA GTATTCTGGA AGTTATGCTG AACTCAGGAT ACAATGATTT AAAAGCATTC
AGACAACTGT TCAAAAAAAG CTCTGGTATG ACCCCTAAAG ATTATCGCGA TAAGTTTAAA
GCGCGGATTG CATAA
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| Protein sequence | MIQVALLLTN KYRLLSVAAI LDVFDTVNSY YEAEGQEALF NLSILYAANS NNEVPVFNTH
KPRPLNPANT QDLVLIPAFG TADMSAAIQE NLEFLPWLKQ QHQKGVELAS FCTGAFLLAA
SGLLDGKSAT THIHASTSFA SSFPDVYLRP NEVVTYDQGI YTSGGATSTF HLLLKLIHNY
ASREIAVRTA KVFAIDMNRE QQSYFGTFIP TRDHGDELVT KTQLCIENAY NKAATVEDIL
QHIPASRRNI ERRFKQATGN TLIAYLQKTR IEKAKKLLEQ TNQSILEVML NSGYNDLKAF
RQLFKKSSGM TPKDYRDKFK ARIA
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