| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1173 |
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| Symbol | pyrB |
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| ID | 8252271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1389914 |
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| End bp | 1390846 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644934828 |
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| Product | aspartate carbamoyltransferase catalytic subunit |
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| Protein accession | YP_003091453 |
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| Protein GI | 255531081 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
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| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGTAG AAAAATTATC AACCCGACAT CTCTTAGGCA TCAAAGATAT TAACCGGAAT
GATATCGAAC TGATCTTCGA GACTGCAGAT AATTTTAAAG ATGTGATTAA CCGGCCCATA
AAAAGGGTGC CCTCATTAAG GGACATCACC ATTGCCAATA TATTTTTTGA GAACTCCACA
CGGACCAAAC TTTCTTTTGA ACTGGCAGAA AAAAGACTTT CGGCCGATGT GGTCAACTTT
GCTGCATCCT CATCTTCTGT AAGTAAAGGT GAAACGCTGA TAGATACTGT AAACAATATC
CTGGCTATGA AAGTAGACAT GGTAGTGATG AGACACCCTT ATGCGGGTGC AGGTCAGTTT
TTGAGCAGAC ACATTAAAGC CCAGATTGTA AATGCCGGCG ACGGTGCCCA TGAACACCCA
ACACAGGCTT TACTGGATGC TTTTTCAATC CGGCAGAAGC TTGGCGATGT GGCCGGAAAA
AAAGTAGTGA TCGTTGGCGA TATCCTGCAC TCCAGGGTAG CCATTTCCAA TATTCTTTGT
TTACAAAAAT TAGGTGCCGA AGTAATGGTC TGCGGCCCCA CTACCCTGAT CCCAAAGCAC
ATTGAAAGTT TAGGTGTAAA AGTTGAACAC AACCTGATCA AAGCCCTGAA CTGGTGCGAT
GTAGCCAATA TGCTGCGCAT ACAACTGGAA AGACAGGACA TCAAATACTT CCCCTCTTTA
AGAGAATATG CCATGATGTA CGGACTGAAC AAACAGATTC TTGACAATCT GGATAAAGAA
ATTGTGATCA TGCACCCCGG ACCGATAAAC CGTGGCGTAG AGATCACCAG TGACGTAGCC
GACAGCAAAC AATCCATCAT CCTGGAGCAG GTTGAAAACG GGGTTGCCGT ACGTATGGCT
GTCCTGTACC TGCTGGCCGC CCAAAACGAC TAA
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| Protein sequence | MAVEKLSTRH LLGIKDINRN DIELIFETAD NFKDVINRPI KRVPSLRDIT IANIFFENST
RTKLSFELAE KRLSADVVNF AASSSSVSKG ETLIDTVNNI LAMKVDMVVM RHPYAGAGQF
LSRHIKAQIV NAGDGAHEHP TQALLDAFSI RQKLGDVAGK KVVIVGDILH SRVAISNILC
LQKLGAEVMV CGPTTLIPKH IESLGVKVEH NLIKALNWCD VANMLRIQLE RQDIKYFPSL
REYAMMYGLN KQILDNLDKE IVIMHPGPIN RGVEITSDVA DSKQSIILEQ VENGVAVRMA
VLYLLAAQND
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