Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1135 |
Symbol | |
ID | 8252229 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 1331281 |
End bp | 1332246 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644934786 |
Product | ApbE family lipoprotein |
Protein accession | YP_003091415 |
Protein GI | 255531043 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.930021 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTTCT TTTCTGGATA TGCTGACTTG CGGGAGTATA CCATTAAAGG TTATGCCCAG GGAACTGACT ATACGGTTAA ATATTTTGCA GCAGACAGCA TTGTTACGAA AGCGGATATT GACCGTATTT TGAATGCTAT AGATTCCTCT ATGTCACTTT ATAAACCTTA TTCTTTAATA TGCAGGTTTA ATGCAGCTGA TGAGGGTTTG CATCTGGACC AGCACCTTGT GAAGGTGATG CGCAAGTCAT TTGCCGTTTA CAAAGATACC CGGGGGAAAT TTGATGCCAC CGTTGAGCCG TTGGTACAGG CCTGGGGATT TGGTGCCAAG CCCATCATTA AATTCCCTGA TAGTGCGGAA GTTAAAATGC TGTTAGCTTG TGTGGGTATG AATAACCTGA GTTTAAAAGG AGATTATCTT AAAAAAAGCA GGCCTTGTAT AAAACTGGAC CTGAACGGGA TTGCACAGGG CTATAGTGTA GATGTTATTG CCGATTATCT GCAACAAAAA AAAATAAAGT CCTTTGTTGT GGAATTAGGA GGAGAACTTA GAATGAAAGG ACCTAAGCCT GACGGAAGCT CGCTACGTAT TGGTATTGAA GGCCCCGCAA TGACTGCGGA TGCTGAACCT GTGATCAAAC ATGTCGTCCG TATTAATAAT GGCGCAATAA CAACTGCAGG AAATTATAGA AAATACCTGC TAAACGGGGC AAAAAAAATT GCACACCTTA TTGATCCTAA AACGGGCTAT CCTTTAGACA ATGCATTGAT CAGCGTAACG ATTTATGCAA AGGACGCCAT TACTGCCGAT GGTTATGATA GTCCGATTAT GGCAATGGGC GTTAAAGAAG CCCTGGATTT TGTCAAAGCA AGGAAGGGAA TGGAAGCTTA CATTATTTAT CACAAGAAAG ATGGTAGTGT GGCCGACACA CTGACCAGTG GTTTCAGGAA AATGCTGGTA GACTAA
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Protein sequence | MNFFSGYADL REYTIKGYAQ GTDYTVKYFA ADSIVTKADI DRILNAIDSS MSLYKPYSLI CRFNAADEGL HLDQHLVKVM RKSFAVYKDT RGKFDATVEP LVQAWGFGAK PIIKFPDSAE VKMLLACVGM NNLSLKGDYL KKSRPCIKLD LNGIAQGYSV DVIADYLQQK KIKSFVVELG GELRMKGPKP DGSSLRIGIE GPAMTADAEP VIKHVVRINN GAITTAGNYR KYLLNGAKKI AHLIDPKTGY PLDNALISVT IYAKDAITAD GYDSPIMAMG VKEALDFVKA RKGMEAYIIY HKKDGSVADT LTSGFRKMLV D
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