Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1132 |
Symbol | |
ID | 8252226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 1326138 |
End bp | 1328678 |
Gene Length | 2541 bp |
Protein Length | 846 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644934783 |
Product | ATPase AAA-2 domain protein |
Protein accession | YP_003091412 |
Protein GI | 255531040 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.502514 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.57149 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGCTA AATTTTCTCC ACAAGTAAAA GACGTGATAT CTTTTAGCAG GGAAGAAGCC CTGAGATTAG GTCACGATTA CATAGGCGCA GAACATCTTT TGTTAGGCCT TATTCGCGAA GGCGATGGTA TGGCCATTAA GATATTAAAA TCACTAGGTG TTGATACTTC AAAACTTCGT CGCTCGATTG AGGATTCGGT TAGGGGTACG TCGAGTGTAA CGGTTAACCT GGGAAACATC CCCTTAACCA AACAAGCAGA AAAAGTTTTA AAGATCACTT ATCTGGAAGC AAAGATCTTC AAAAGCGATT TGATAGGTAC AGAACACCTG TTGCTTTCTA TTCTTCGCGA TGATGATAAC ATTGCCTCAC AGATTTTATT ACAGTTTAAC ATCAATTACG AGATATTTAA ACAGGAGGTT GAAGTGAACA AGAACGGTTT TAGAGACGAA ACGCAGAACA GTGCATCAAC AGGTGGAGAT GATGACTACC GCGAAGAAGA ATCATTCAGC AGCCCTAAAA AGGTGTCGGA CATTAAATCT AAAACCCCGG TTCTGGATAA TTTTGGAAGA GACCTGACCA AGGCAGCGGA AGAGGGCCGT TTGGATCCTA TTGTTGGCCG TGAGAAAGAA ATTGAACGCG TGTCGCAGAT ATTATCACGA CGTAAAAAGA ACAATCCGAT CCTGATTGGT GAACCTGGTG TAGGTAAATC TGCTATTGCA GAAGGTCTGG CCCTCCGTAT TGTTCAACGT AAAGTTTCCA GGGTACTGTT CAATAAACGT GTGGTAACAT TAGACCTGGC TTCATTAGTT GCCGGCACAA AATACCGCGG ACAGTTTGAA GAGCGTATGA AGGCGGTGAT GAATGAGCTG GAAAAATCTA CCGATGTGAT CCTGTTTATT GATGAGATCC ATACAATTGT AGGCGCAGGT GGTGCTTCAG GTTCTTTAGA TGCATCAAAT ATGTTCAAAC CAGCTTTGGC CAGGGGCGAA ATTCAATGCA TTGGGGCAAC TACGCTGGAT GAATACCGTC AGTATATAGA AAAGGATGGG GCTTTGGACC GTCGTTTCCA GAAGGTAATG ATCGAGCCGG CTTCACCTGA TGAAACCATA GAAATTCTGA ACCGTATCAA AGAAAAATAT GAAGATCACC ACGGTGTGAC CTATACAGAT GAGGCGATTG CTGCCTGTGT GGCGCTTACT TCAAGGTACA TTACCGACAG GTTTTTGCCG GATAAGGCAA TTGATGCTTT GGACGAGGCC GGATCAAGGG TGCATTTAAC AAACATACAT GTTCCTGATA ACATCATTGC GATTGAGAAT AAGATTGAAG AGATCAAGGT TGAAAAAAAT AAGGTTGTAA AAAGCCAGAA ATATGAAGAG GCCGCCAAAT TAAGAGATAC TGAAAAAAAT CTGTTGGAAG AGCTTGATCG TGCAAAGGCA GAATGGGAGG CTGAAACTAA AACGAAACGT TATACAGTTA CAGAAGATAA TGTTGCAGAG GTGGTTTCAA TGATGACCGG CATTCCATTA CAACGTGTTG GACAAACTGA TAGTGTAAAG CTGTTAAATA TGTACGATAC TGTTGCGACC AAGATCATTG GACAGGATGA TGCAATTAAA AAATTGACAA AAGCTATTCA GCGTACCAGA GCGGGATTAA AGGACCCTAA AAAACCGATC GGTTCGTTTA TATTTCTTGG GCCTACCGGT GTTGGTAAGA CTGAGCTTGC AAAGGAACTT GCACGTTTCA TGTTTGACAG TGATGATTCA CTGATCCAGA TTGACATGAG TGAGTACATG GAGAAATTTG CTGTATCGCG TTTAGTAGGT GCGCCTCCGG GATACGTGGG GTATGAGGAA GGCGGACAGC TGACTGAAAA AGTACGCAGA AAACCGTATG CGGTAATTTT GCTGGATGAG ATTGAGAAAG CACACCCGGA TGTGTTTAAT ATCCTGTTGC AGGTATTGGA TGAGGGACAG CTTACGGATA GTCTTGGTCG TAAGGTTGAC TTCAGAAATA CCATCATTAT TATGACCTCT AATATCGGGG CCCGTCAGCT GAAAGATTTT GGGCAGGGAG TAGGTTTTTC TACCGCTGCA AAAAGCAACC AGGCTGATGC ACATTCGAGG GGAGTAATTG AAAATGCGTT GAAACGCGCT TTTGCCCCTG AGTTCCTGAA CCGTGTAGAT GATGTAGTAG TATTTAATTC ACTGGGTAAA GAAGAGATCT TCAAGATCAT AGACATTGAG TTAAAATCGT TATTTGGTCG TGTACATAAT TTAGGTTACG AGGTTAAGCT TACTGAGAAA GCAAAAGAAT TTATAGCCGA TAAAGGGTTT GATTCTAATT TTGGTGCAAG ACCGCTTAAA CGTGCGATCC AGAAATATCT GGAAGATCCG ATCGCTGAAG AGATCCTTAA AGGAGAGATC CATGATGGAG ATATTCTCGA AATCGATTAC AACAAAGAAA GTAATGAAAT AGTTGTAGAG AATAGAAGTC CGGGTAAGAA AAAGAAAAAA GAAGAGGGAA GTGTAGAATA A
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Protein sequence | MEAKFSPQVK DVISFSREEA LRLGHDYIGA EHLLLGLIRE GDGMAIKILK SLGVDTSKLR RSIEDSVRGT SSVTVNLGNI PLTKQAEKVL KITYLEAKIF KSDLIGTEHL LLSILRDDDN IASQILLQFN INYEIFKQEV EVNKNGFRDE TQNSASTGGD DDYREEESFS SPKKVSDIKS KTPVLDNFGR DLTKAAEEGR LDPIVGREKE IERVSQILSR RKKNNPILIG EPGVGKSAIA EGLALRIVQR KVSRVLFNKR VVTLDLASLV AGTKYRGQFE ERMKAVMNEL EKSTDVILFI DEIHTIVGAG GASGSLDASN MFKPALARGE IQCIGATTLD EYRQYIEKDG ALDRRFQKVM IEPASPDETI EILNRIKEKY EDHHGVTYTD EAIAACVALT SRYITDRFLP DKAIDALDEA GSRVHLTNIH VPDNIIAIEN KIEEIKVEKN KVVKSQKYEE AAKLRDTEKN LLEELDRAKA EWEAETKTKR YTVTEDNVAE VVSMMTGIPL QRVGQTDSVK LLNMYDTVAT KIIGQDDAIK KLTKAIQRTR AGLKDPKKPI GSFIFLGPTG VGKTELAKEL ARFMFDSDDS LIQIDMSEYM EKFAVSRLVG APPGYVGYEE GGQLTEKVRR KPYAVILLDE IEKAHPDVFN ILLQVLDEGQ LTDSLGRKVD FRNTIIIMTS NIGARQLKDF GQGVGFSTAA KSNQADAHSR GVIENALKRA FAPEFLNRVD DVVVFNSLGK EEIFKIIDIE LKSLFGRVHN LGYEVKLTEK AKEFIADKGF DSNFGARPLK RAIQKYLEDP IAEEILKGEI HDGDILEIDY NKESNEIVVE NRSPGKKKKK EEGSVE
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