| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1070 |
|---|
| Symbol | |
|---|
| ID | 8252164 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 1257420 |
|---|
| End bp | 1258283 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 644934721 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003091350 |
|---|
| Protein GI | 255530978 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01784] conserved hypothetical protein (putative transposase or invertase) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.950669 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAACC AAACTATACA AACCACCACT TATATCGATC CATTTTTAGA TGTCGCTTTT
AAACGGTTAT TTGCCACAGA TGAAAGTAAG CCAATACTCA TCGGTTTTTT AAATGAGTTG
TATAAAGGTA AAAAGTACAT TACAGAAATC CAGTTCGGAA AAAACGAATA TCATGGCGAA
ATAAAAGAAG AGGGAGGTGT GGTATTCGAC ATAGTTTGTA CCGATGCCGA CGGAAGCAGG
TTTATTATCG AGGTTCAAAC CGGTTACCAG AAATATTTTA AAGAACGTGC TTTGTACTAT
ACTTCAAGGG CCATCAGCGA ACAATCACCA AAAGGAAAAA TAAAAGGATG GGCTTATAAC
ATCTCAGAAG TTTACCTGCT GGCCTTCCTG GAAAACTTTA ACCTCCCCGA CACCCCCAGA
TATGAATACC TGCAGGATAT ATGCCTGGCC AACAGGCATA CAGGAAAAAT ATTTTACGAT
AAACTCAGCT TTATATTTAT AGAGATGCTT AACTTTGTGA AGAAGCCGCA TGAATTGCAT
ACAGAACTGG ATAAATGGTT ATATGCATTA AAACATTTAA CAGAATTTAA ACAGCGTCCT
GCATATTTAT CCGGCCCGGA ATTTGATCAG TTTTTTGCAT TAGCTAAATA CGCCAACCTG
ACTAAGGAGG AAAGAGATAT GTACAATACA AGTTTAAAGC AGAAATGGGA CAGTAAAAAT
GTGTTGGATT ATGCTGTAGA AGAAGCAAAA CACAAAAAAG CTGTTGAAAT TGCCCGTCAA
ATGTTATCTG ACAACTTGCC TATTGATCAG ATTATAAAAT ATACCAAACT TTCAAAAGAA
GAAATCCAGG CCCTTCAAAA ATAA
|
|---|
| Protein sequence | MPNQTIQTTT YIDPFLDVAF KRLFATDESK PILIGFLNEL YKGKKYITEI QFGKNEYHGE
IKEEGGVVFD IVCTDADGSR FIIEVQTGYQ KYFKERALYY TSRAISEQSP KGKIKGWAYN
ISEVYLLAFL ENFNLPDTPR YEYLQDICLA NRHTGKIFYD KLSFIFIEML NFVKKPHELH
TELDKWLYAL KHLTEFKQRP AYLSGPEFDQ FFALAKYANL TKEERDMYNT SLKQKWDSKN
VLDYAVEEAK HKKAVEIARQ MLSDNLPIDQ IIKYTKLSKE EIQALQK
|
|---|
| |