| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1038 |
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| Symbol | |
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| ID | 8252132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1214267 |
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| End bp | 1215451 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644934691 |
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| Product | helix-turn-helix- domain containing protein AraC type |
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| Protein accession | YP_003091320 |
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| Protein GI | 255530948 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.895405 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.923131 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGCTTTT TGAATTTTTT AACCAGCATT ATCTGCTTTT TTTTATTGCT GTTCTCCTTC
AACCTGTTTT TCGCCAAACG GGGTAATCCT GTATTGAATT ATTTACTGGG AGTTATCTTT
TTTTCGAGAT TCGGTCAAAT GTTGGTCCTT TTATTGGTAA ACTCAAAACA GCAGACTTAT
TTTCCTTTTT TTCATCAGCT TTTTACCCCA TTGTACTTTG CCGCCCCGGC TTGCTTTTAC
CTTTATGTCA GCCATTTTAT TAACCCGGAT AAAAAATTAC CCTACAAGGA GTGGCTTCAT
TTTATCCCTG CTGCCCTGGC CATTATCCAT GTTATCCCAT GGCCTTTTGC TCCGGTTATC
AACTGGCACG ATATCTTAAA ACAGATCACT GATAATAAAC AGCTTTTTAT TAACGAAAGG
AGCGGGATAT TACCGGCCTA TTTATATTCT GTAGGCAGGC CTGCATTGGT ACTTGGTTAT
TTAGCCGCCA CCTGGTATAG GGTGTTAAAT TCGGAGGTAT TGAAAGCAAA ACCCAAAGCA
GATACTGGTA AGAAATGGAT CTTACTTTTT GTAAAGGCAG CAACGTTTTT CCAGCTCGTT
AGTTTTTTGC CATTGCTCAG TACAAGCCAG GACAGAACTT ATGCCAATTC CATATTTGTG
ATCATCAGCT GTCTCGTTTT GATTGTTATT GTTGTGTTCA TCCTACATCA GCCGGATATT
TTTTACCGTT ATTTAATAAC GCCTATTGAT GGTATAAAAG TCGCAGATAA AGGCCAGGAA
AGGGTAGAAG ATACTACATT GAATACCGGT AGTACTAAAA AAATCATCTT ATTACCTGAA
CAATCAGCTG CATACGCAGC TGAGATGGAA GCCTTAATGG CAGCTAAAAA GTTATACCTG
ATATCGGATT TTCAGATTGT TGACCTGGCT GCTGAAATGA ATATTTCTGT TCATCACTGC
TCATTTGTAA TCAACAACGT AATCGATAAA AACTTTCGTG ATTGGATAAA TGGTTACCGC
ATTAGCTATT TTAGCACACA ATATCCACTT CACGCGCACA AAATGACCAT TGAAGCCATT
GCTCATGAAT CTGGCTTTAA AAGCCTGGCA ACTTTTTACA ATGCCTTTAA AAAAGAGACA
GGTTTGATGC CCAAAGCCTA TTTCTCACAA AAGAAGGTAT CATAA
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| Protein sequence | MGFLNFLTSI ICFFLLLFSF NLFFAKRGNP VLNYLLGVIF FSRFGQMLVL LLVNSKQQTY
FPFFHQLFTP LYFAAPACFY LYVSHFINPD KKLPYKEWLH FIPAALAIIH VIPWPFAPVI
NWHDILKQIT DNKQLFINER SGILPAYLYS VGRPALVLGY LAATWYRVLN SEVLKAKPKA
DTGKKWILLF VKAATFFQLV SFLPLLSTSQ DRTYANSIFV IISCLVLIVI VVFILHQPDI
FYRYLITPID GIKVADKGQE RVEDTTLNTG STKKIILLPE QSAAYAAEME ALMAAKKLYL
ISDFQIVDLA AEMNISVHHC SFVINNVIDK NFRDWINGYR ISYFSTQYPL HAHKMTIEAI
AHESGFKSLA TFYNAFKKET GLMPKAYFSQ KKVS
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