Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1023 |
Symbol | |
ID | 8252117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 1199203 |
End bp | 1200498 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644934677 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003091306 |
Protein GI | 255530934 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0652623 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACGA CTAAAATTGG TAATTATCGC TGGATTGTTT GCGGACTGCT CTTCTTTGCA ACAACCATTA ATTATATAGA CCGGCAGGTG ATCGGGTTGT TAAAACCCAC GCTGGAAAAA GAGTTTCACT GGACAGAGGT CGATTACGGC TATATCGTGA TGGCCTTTGC CGGTATGTAT GCACTGGGCT ATGTGGTTTT TGGTAGTTTT ATTGATAAAG TTGGTACCAA GATCGGTTAT AGCATATCTG TTATAGTGTG GAGCATCGCT GCCATGCTGC ATGCTGTAGT TAAAGGCACA GTAGGTTTTG GTATGGCCAG GGGATTACTG GGGCTATCAG AGGCCGGTAA TTTCCCTGCG GGTGTTAAAG CTGTGGCAGA ATGGTTCCCT AAAAAAGAAC GGGCCCTGGC TACAGGAATA TTTAATTCTG GTACCAGCAT CGGTGCAGTG GTGGCCCCAA TTCTGGTACC CTGGATTTTG GGTATCTACG GATGGCAGGA AGCCTTCTGG ATTACGGGCG CGCTGGGCTT TATCTGGCTC ATATTCTGGT GGATCTTTTA TGAAATCCCA TCCAAACAAA AGCGGCTTAA AAAGGCCGAG TATGATTTTA TACACAGCGA TCCAGATGAT GAGCTGCAGG AAAAGCCGGT AAAATTGAAA TGGATCCAAC TGCTTGGTTT ACGCCAAACC TGGGTATTCA TTGTAGGTAA GGTACTTACC GATCCGATCT GGTGGTTTTT CCTGTTCTGG TTACCGGCCT ATTTTGCAGA TACTTTTGCC TTAGACCTTA AAAAACCCAG CCTGCACCTT GCCGTAGTTT ACGCAGCCAC AACGTTTGGC AGCATTGGCG GGGGCTACCT GTCGTCTTAT TTTATCAAAC GCGGATGGCC GGTACTTAAA GCCAGAAAAA CCACCCTGCT CATCGTGGCC ATTGCAGTGG TGCCTATATT TTTTGCCCAG TTTGCTCCCA ATATCTGGGT AGCGGTGGCC ATCATCAGCA TTGCAACCGC TGCGCATCAG GCATGGAGTG CCAATATTTT TACCATCGTT TCAGATATTG TGCCTAAACA AGCCGTAAGT TCTGTGGTAG GTATCGGTGG TATGTCGGGT TCCATTGCTT CAACTTTATT TCCGCTGCTG GTGGGTTCAC TGCTTGCCTA TTATAAAAAT ATTGGTAACA TTGGTGCTGC TTACAATATT TTGTTCATCA TCTGTGGCTG TGCTTATTTC CTGGCATGGT TCATTATACA AATGCTTACC AAAAAAATGA AACCTGTTGA TTTTAGTAAC CTATAA
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Protein sequence | METTKIGNYR WIVCGLLFFA TTINYIDRQV IGLLKPTLEK EFHWTEVDYG YIVMAFAGMY ALGYVVFGSF IDKVGTKIGY SISVIVWSIA AMLHAVVKGT VGFGMARGLL GLSEAGNFPA GVKAVAEWFP KKERALATGI FNSGTSIGAV VAPILVPWIL GIYGWQEAFW ITGALGFIWL IFWWIFYEIP SKQKRLKKAE YDFIHSDPDD ELQEKPVKLK WIQLLGLRQT WVFIVGKVLT DPIWWFFLFW LPAYFADTFA LDLKKPSLHL AVVYAATTFG SIGGGYLSSY FIKRGWPVLK ARKTTLLIVA IAVVPIFFAQ FAPNIWVAVA IISIATAAHQ AWSANIFTIV SDIVPKQAVS SVVGIGGMSG SIASTLFPLL VGSLLAYYKN IGNIGAAYNI LFIICGCAYF LAWFIIQMLT KKMKPVDFSN L
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