Gene Phep_0992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0992 
Symbol 
ID8252086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1159398 
End bp1159853 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content46% 
IMG OID644934646 
ProductCMP/dCMP deaminase zinc-binding 
Protein accessionYP_003091275 
Protein GI255530903 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2131] Deoxycytidylate deaminase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGTAA AACCAAGTTT TAACCATATT TTTATGAATT TAGCATCCGA CCTGGCAGGC 
CGTTCACATT GTGTGCGTGC GCAGGTAGGG GCTGTTTTAA CAAAAGATAC ACGTATCATC
TCGATCGGTT ACAATGGCCC TCCGGCAGGG ACACACAATT GTGATGAAGA ATGGCCGGAA
GCAGGTTGTG CCAGGGATTC CCGGGGAAGC TGCTCTCTGG CCCTGCATGC AGAAGAGAAT
GCCATATTGT ATGGTATAAA GAACGGGTCT AAAATTGAAG GTTCAACATT ATACACCACT
TTATCGCCTT GCATTGCCTG TGCCCGCCTC ATTTTATCTT CGGGCATAAG GGTGGTTCAT
TACCGGGATT CGTATGCAGC CTATAAAGGA TTGCCCAGCG ATGAAGGCGT TGATTTTTTG
AAGAGATTTG GCGTGGAAGT GATTAAGTAT TCTTAA
 
Protein sequence
MTVKPSFNHI FMNLASDLAG RSHCVRAQVG AVLTKDTRII SIGYNGPPAG THNCDEEWPE 
AGCARDSRGS CSLALHAEEN AILYGIKNGS KIEGSTLYTT LSPCIACARL ILSSGIRVVH
YRDSYAAYKG LPSDEGVDFL KRFGVEVIKY S