Gene Phep_0895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0895 
Symbol 
ID8251989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1048577 
End bp1048876 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content35% 
IMG OID644934550 
ProductExcinuclease ABC C subunit domain protein 
Protein accessionYP_003091179 
Protein GI255530807 
COG category[L] Replication, recombination and repair 
COG ID[COG2827] Predicted endonuclease containing a URI domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00270858 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATAGAG GCGGCTGCAT ATACATCATG TCCAATCTTG CCAGAACAAC ATTTTATATC 
GGTGTCACTT CAGATTTATA CGCCAGAATA CAGGAGCACA AAACTAAAAA GTATCCCAAT
TCATTTACTG CAAAATATAA ATTACATTTT TGCATTTACT ATGAAATGCA GCCATCAATT
GAAGAAGCAA TAGCCAGAGA AAAAGAGGTC AAAAAATGGA GTAGAAGCAA GAAAATTAAA
CTGATAACTA CATTGAACCC TAAATGGAAT GACCTTTGGG AGGAGATACA GCAATGGTAA
 
Protein sequence
MDRGGCIYIM SNLARTTFYI GVTSDLYARI QEHKTKKYPN SFTAKYKLHF CIYYEMQPSI 
EEAIAREKEV KKWSRSKKIK LITTLNPKWN DLWEEIQQW