Gene Phep_0882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0882 
Symbol 
ID8251976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1036569 
End bp1037180 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content41% 
IMG OID644934537 
Productfumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_003091166 
Protein GI255530794 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00308706 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGATAA TTGCCATAGG ACGCAACTAC GCAGAACACG CCAAAGAATT AAATAACCCC 
ATACCCGATC AGCCGGTTAT ATTTTTAAAA CCCGACACCG CCGTTTTAAA AGACAACAAA
CCTTTTTACA TTCCCGATTT CTCTTCCGAC ATCCATTACG AGATTGAAGT GGTATTAAAG
ATAGCAAAAG AAGGAAAGCA CATTGCTGAA AAATTTGCGC ACAAGTATTA TGAAGAACTG
GGTTTGGGTA TAGATTTTAC CGCCCGGGAT ATCCAAAGTG CACATAAAGC AAAAGGATTG
CCCTGGGAAC TGGCCAAGGC ATTCGACCAT TCAGCAGCCA TCAGCAATTT TATTCCTAAA
ACAGCCATTA AAGATCTCTC TGACCTTTCC TTTACCTTAA ACATTAACGG AGAACCCCGG
CAAAATGGCA ATACCAGGGA TATTTTATTC TCCTTTGAAA AAATAATCGC TTTTGTATCC
CGATACATTA CCCTTAAAAA GGGAGACCTG ATTTTTACCG GTACCCCGGA AGGGGTTGGC
CAGGTTAAAC CAGGTGATAA ACTGGAAGGC TGGCTGCAGG GCCAACAACT ACTTAATTTT
GATATAAAAT AG
 
Protein sequence
MKIIAIGRNY AEHAKELNNP IPDQPVIFLK PDTAVLKDNK PFYIPDFSSD IHYEIEVVLK 
IAKEGKHIAE KFAHKYYEEL GLGIDFTARD IQSAHKAKGL PWELAKAFDH SAAISNFIPK
TAIKDLSDLS FTLNINGEPR QNGNTRDILF SFEKIIAFVS RYITLKKGDL IFTGTPEGVG
QVKPGDKLEG WLQGQQLLNF DIK