Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0862 |
Symbol | |
ID | 8251956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 1015051 |
End bp | 1017009 |
Gene Length | 1959 bp |
Protein Length | 652 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644934517 |
Product | DNA gyrase, B subunit |
Protein accession | YP_003091146 |
Protein GI | 255530774 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00557988 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCGAAG AAAAAGATCC AAAGTCAAAT TATTCGGCAG ATAATATACA GGTATTAGAA GGTTTGGAAG CGGTGCGTAA GCGCCCTTCG ATGTATATAG GAGATACCGG AATTAAAGGT TTGCACCACC TGGTGTATGA GGTTGTAGAC AACTCTATAG ATGAAGCACT GGCAGGACAT GCTGATACCA TTTATGTAAA TATTTTAAAA GATAACTCAA TCAGGGTTGA AGATAACGGA CGTGGTATCC CTACCGGGAT CAACACCAAG GAACAAAAGT CGGCTCTTGA AATTGTAATG ACCGTATTAC ATGCCGGTGG TAAATTTGAT AAGGATACTT ATAAAGTATC CGGCGGATTG CACGGTGTAG GGGTAAGTTG CGTAAATGCC TTATCTACCC ATTTAAAAGC CGAAGTTCAT CGTGAAGGAA AGATCTGGGT ACAGGAATAC AATATCGGTA AACCACTCTA TGAGGTAAAA TCTATAGGTG ACACCGATAA ACTCGGTACC ATTATAACAT TCACTCCCGA CCCAACCATC TTTACCCAAA CAACAGAATA CCGTTATGAT ACACTGGCTT CAAGATTAAG AGAGCTTTCT TTCCTGAATA AAGGTATCAA ACTTACGCTG ACTGACGAGC GTGAAACCTT GGAAAACGGC GAGTTTCTTT CCGAACTTTT CCATTCCGAA GGCGGCTTAA AAGAATTTGT CCAGTTTCTG GATGGTACAA GACCATCTCT GATTCCTGAG CCTATTTATG TTGAGGGCAT AAAAAATGGT ATCCCAGTAG AGCTTGCCCT GCAATACAAT GACAGTTATT CCGAAAATGT GCACTCTTAT GTGAACAACA TCAATACACA TGAAGGCGGT ACACATATTG CTGGTTTTAG AAGAGGCTTA ACCAGAACAT TAAAAGCTTA TGCCGATAAA TCAGGCCTGC TGAAGAATGT GAAGTTTGAG ATTACCGGTG ATGACTTTAG GGAAGGCTTA ACCGCAGTAA TTTCGGTTAA AGTACAGGAA CCTCAGTTTG AAGGGCAAAC CAAAACCAAG CTGGGCAACT CTGAAGTGAT GGGGGCAGTT GATATTGCCG TTGGTGAAGC TTTGGGTATT TATCTGGAAG AGTATCCTAA AGAGGCCAGA ATGATCGTTA ACAAGGTTAT TCTTGCCGCT ACAGCACGTG CAGCGGCCCG TAAGGCCCGC GAAATGGTAC AACGTAAAAG TGTAATGGGT GGTTCGGGCT TACCAGGTAA GCTGGCCGAC TGTTCTGATA GTGATCCGGA AAAATGTGAA CTCTACCTGG TAGAGGGTGA CTCGGCCGGT GGTACTGCCA AACAAGGGCG CGACCGTAAC TTCCAGGCTA TATTGCCTTT GAAAGGTAAA ATCCTGAACG TAGAAAAGGC AATGGAGCAT AAGATCTATG AAAATGACGA GATCAAAAAT ATGTTCACGG CACTGGGTGT GAGTATTGGT ACTGAAGAGG ACGATAAGGC TTTAAATTTA GCCAAGCTGC GCTACCACAA GATTGTGATC ATGACGGATG CTGATATTGA CGGCTCTCAC ATTACTACGC TTATTTTAAC CTTCTTCTTC CGGTATATGA AAGCCCTGAT TGAAGCAGGT TATGTATATA TTGCTGCACC ACCGCTTTAC CAGGTTAAAA AAGGTAAGGA ATTTGAATAT TGCTGGAACG ATAAGCAGCG CGATGACGCT GTACAGCGTT TAAAGGGTGC AGGAAAGGAA GAAAGTGTGC ACATCCAACG TTATAAAGGT TTGGGAGAGA TGAATGCAGA ACAATTGTGG GATACTACCT TAAATCCGGC TACGCGTACA TTAATGCAGG CTACAATTGA AAATGCTGCT GAGTGTGATC ATACTTTCTC TATGCTGATG GGGGACGAAG TTGCACCACG CAGGGATTTC ATTGAAAGAA ATGCGAAGTA TGCGAAGATT GATGCTTAG
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Protein sequence | MSEEKDPKSN YSADNIQVLE GLEAVRKRPS MYIGDTGIKG LHHLVYEVVD NSIDEALAGH ADTIYVNILK DNSIRVEDNG RGIPTGINTK EQKSALEIVM TVLHAGGKFD KDTYKVSGGL HGVGVSCVNA LSTHLKAEVH REGKIWVQEY NIGKPLYEVK SIGDTDKLGT IITFTPDPTI FTQTTEYRYD TLASRLRELS FLNKGIKLTL TDERETLENG EFLSELFHSE GGLKEFVQFL DGTRPSLIPE PIYVEGIKNG IPVELALQYN DSYSENVHSY VNNINTHEGG THIAGFRRGL TRTLKAYADK SGLLKNVKFE ITGDDFREGL TAVISVKVQE PQFEGQTKTK LGNSEVMGAV DIAVGEALGI YLEEYPKEAR MIVNKVILAA TARAAARKAR EMVQRKSVMG GSGLPGKLAD CSDSDPEKCE LYLVEGDSAG GTAKQGRDRN FQAILPLKGK ILNVEKAMEH KIYENDEIKN MFTALGVSIG TEEDDKALNL AKLRYHKIVI MTDADIDGSH ITTLILTFFF RYMKALIEAG YVYIAAPPLY QVKKGKEFEY CWNDKQRDDA VQRLKGAGKE ESVHIQRYKG LGEMNAEQLW DTTLNPATRT LMQATIENAA ECDHTFSMLM GDEVAPRRDF IERNAKYAKI DA
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