| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0855 |
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| Symbol | |
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| ID | 8251949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1009564 |
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| End bp | 1010130 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644934510 |
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| Product | Sua5/YciO/YrdC/YwlC family protein |
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| Protein accession | YP_003091139 |
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| Protein GI | 255530767 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0009] Putative translation factor (SUA5) |
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| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0416487 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTAAGAA CAGAAATTGA AAAAGCACTT GCTGTTTTAA AGGATGGAGG CGTTATACTT
TATCCCACCG ATACCGTATG GGGCCTGGGC TGTGATGCCA CAAATGAACA GGCTGCTGCA
AAAATAAATG CAATTAAAGG CCGTGCGGAG GATAAGAGTT TTATTGTACT TTTAGATACT
GACGCTAAAA TCCAAAGTTA TGTTACTGAA GTACCTGATG TAGCTTATGA CCTTATCGAG
TATGCAGAAA ACCCGCTTAC CTTGGTATTT CCAGGCGCAA AAAACCTGGC AAAAAATGTA
ATCAATGCCG ACGGCAGCGT TGGGATCAGA ATTGCCAGAC ATGAATTCTG TCAGCAACTT
ATCCAGCGTT TTCGAAAACC CATCACCTCT ACTTCTGCCA ATGTATCAGG TGCAGCAACT
CCAGGCTTTT TTGACGAAAT CAGTGAAGAA ATAAAAGTAG CTGTGGATTA TGTGATTGAT
TGGGAACAGG AGCTAAAAAT CAGTAAAAAA CCATCAACTA TTATGAAATT GGCTCCCGGC
GGGCAATTTT CCTTTATTAG AAGGTAA
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| Protein sequence | MLRTEIEKAL AVLKDGGVIL YPTDTVWGLG CDATNEQAAA KINAIKGRAE DKSFIVLLDT
DAKIQSYVTE VPDVAYDLIE YAENPLTLVF PGAKNLAKNV INADGSVGIR IARHEFCQQL
IQRFRKPITS TSANVSGAAT PGFFDEISEE IKVAVDYVID WEQELKISKK PSTIMKLAPG
GQFSFIRR
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