| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0854 |
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| Symbol | |
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| ID | 8251948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1008131 |
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| End bp | 1009537 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644934509 |
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| Product | Polynucleotide adenylyltransferase region |
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| Protein accession | YP_003091138 |
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| Protein GI | 255530766 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00520307 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAACAAC ATTTACAACA CCCTGTTTTT AAATCTCTTG CCCGTATAGC CGACATGCAT
CACATCGAGG CTTATATTGT TGGCGGGTAT GTAAGGGATA TTTTTCTGAA CAGGCCGTCT
AAGGACATTG ATATTGTTGT GCTGGGAAAT GGTATTGAAT TTGCCGAGCT TGTTGGTAAA
CAGCTTCAGA GTAAAGTAGC GGTTTTTAAA AATTTTGGCA CTGCCATGTT AAAATATCAG
GATCTGGAAA TAGAGTTTGT GGGTGCCAGA AAAGAATCTT ACCGCTCCGA TTCCCGCAAA
CCAATTGTTG AAAATGGAAC AATTGAGGAC GATCAGCTGA GAAGGGACTT TACCATTAAC
GCGCTTGCCA TATCCTTGAA CAAGGAAAAT TACGGGCAAC TGGTTGACCC ATTTAATGGA
ATAGCCGACC TGAACAATAA GCTGATCAGG ACACCCTTAG ATCCTGAGCT TACTTTTTCT
GATGATCCCC TGCGCATGAT GCGCGCAATC AGGTTTGCTA CCCAACTCAA TTTTACCATA
GATGCTGCAG CAATAAATGC CATTAAAAAA CAAAAAGAAC GCATTGGCAT CGTATCCAAA
GAACGGATTA CCGACGAACT GAATAAGATA ATTTTATCTG AAGTCCCATC CATTGGTTTT
AAGTATCTAT TTGACACCGG ACTTTTGCAA CTGGTTTTCC CTCAAATGGC CAACCTTTAT
GGCGTTGATA TCATTAACGG AAAAGGACAT AAAGATAATT TCTATCATAC CTTACAGGTG
CTGGATAACA TTTGTGGAAC CACTTCAGAC CTCTGGCTCC GTTGGGCAGC AATTTTACAT
GATATTGCTA AACCTGCTAC CAAACGCTTT GAAGAAGGCC ATGGCTGGAC CTTCCATGGT
CACGAGGACA AAGGCGCAAG GATGGTCCCA AAAATTTTTG CACAGCTTAA ACTACCACTT
AATGAAAAAA TGAAGTTTGT GCAGAAGCTG GTACAACTCC ACCTCCGTCC CATTGTCCTG
GCCCAGGAAG TGGTAACAGA TTCGGCAGTA AGAAGATTAT TATTTGATGC CGGAGAAGAT
ATTGAAAGCC TCATGCTGCT CTGCAATGCT GATGTAACTA CAAAGAATGA ATATAAGGTA
AAAAAATACC GTAATAATTT TGAACTGGTT AAACAAAAAC TCAGGGATGT AGAAGAACGC
GACAAGATCA GGAACTGGCA GCCTCCTATT TCAGGCAATG ATATTATGGA GACATTCGGG
TTAAGCGCAG GAAAGGAAGT GGGCTTAATC AAAAATGCCA TCAGAGAAGC GATTCTTGAA
GGCGAAATAA CCAATACGTA TGATAACGCA TTACAGTTTA TGCTCGAAAA AGCTAAAGAG
TTCGGACTTC ATCCAATAAA GCGTTAA
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| Protein sequence | MEQHLQHPVF KSLARIADMH HIEAYIVGGY VRDIFLNRPS KDIDIVVLGN GIEFAELVGK
QLQSKVAVFK NFGTAMLKYQ DLEIEFVGAR KESYRSDSRK PIVENGTIED DQLRRDFTIN
ALAISLNKEN YGQLVDPFNG IADLNNKLIR TPLDPELTFS DDPLRMMRAI RFATQLNFTI
DAAAINAIKK QKERIGIVSK ERITDELNKI ILSEVPSIGF KYLFDTGLLQ LVFPQMANLY
GVDIINGKGH KDNFYHTLQV LDNICGTTSD LWLRWAAILH DIAKPATKRF EEGHGWTFHG
HEDKGARMVP KIFAQLKLPL NEKMKFVQKL VQLHLRPIVL AQEVVTDSAV RRLLFDAGED
IESLMLLCNA DVTTKNEYKV KKYRNNFELV KQKLRDVEER DKIRNWQPPI SGNDIMETFG
LSAGKEVGLI KNAIREAILE GEITNTYDNA LQFMLEKAKE FGLHPIKR
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