Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0852 |
Symbol | miaA |
ID | 8251946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 1006506 |
End bp | 1007423 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644934507 |
Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
Protein accession | YP_003091136 |
Protein GI | 255530764 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0515522 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGCGA TGGCACAAAA TAAAACATTA ATTGTAATTG TTGGCCCTAC AGGAATAGGA AAAACTGCGC TGGCCATTTC CCTGGCCAGG CATTTTTCCA CTGAAATTAT ATCGGCCGAT TCGAGACAAT TTTTTAAAGA GATGGAAATT GGCACAGCTA AACCTTCAGC CGAAGAACTT AGTGCAGCAC CCCATCATTT TATCAATTCC CATAGTATAA AAACCTTTTT CAGTACTGGT GATTTTGAGG TACAGGCAAT TGAGCTCATC AGTCAGTTAT TTAAAGAACA TGATTTGTTG ATCATGGTAG GAGGCTCTGG TCTTTATATT GATGCCGTAT GTAAAGGACT GGATGATTTG CCTGAAACCG ACCTCAACAT CAGGGAACAA CTGAACCAGC AATTGGCAGC AGAAGGCCTG GAATCTATAA AAAAAATGCT GAGCGAAGCC GATCCTGAAT ACTATCAGAA AGTCGACCAG TCAAACCCCC AGCGTATCAT CAGGGGCCTG GAGTTTTACC TGTCAACAGG GACAAAACTA TCTGCCCATC TCACCAACAG TAAAAAAGTC AGACCTTTTA ACATCATAAA GATCGGTTTG AATATGCAGC GTCCCGAACT TTATCAGCGG ATCAACCAAC GTGTAGATCA GATGATGGAA ATGGGTCTCC TGGATGAAGT GAAAAGTTTA CTGCCGTACA GAAAATATAA TGCACTCCAC ACAGTTGGTT ATACTGAACT GTTCTCCTAC CTGGATGGTG AAATCACTTT ACAGCAAGCT ATAGACCATA TCAAACAAAA TACACGCCGG TTTGCTAAAC GACAGCTCAC CTGGTTTAGA AGAGATGACA GCACTGCCTG GTTTCAACCC GGACAGGGTG CTGCTGTCAT CAAATATATC ATAGAAAATA AAAATTAA
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Protein sequence | MPAMAQNKTL IVIVGPTGIG KTALAISLAR HFSTEIISAD SRQFFKEMEI GTAKPSAEEL SAAPHHFINS HSIKTFFSTG DFEVQAIELI SQLFKEHDLL IMVGGSGLYI DAVCKGLDDL PETDLNIREQ LNQQLAAEGL ESIKKMLSEA DPEYYQKVDQ SNPQRIIRGL EFYLSTGTKL SAHLTNSKKV RPFNIIKIGL NMQRPELYQR INQRVDQMME MGLLDEVKSL LPYRKYNALH TVGYTELFSY LDGEITLQQA IDHIKQNTRR FAKRQLTWFR RDDSTAWFQP GQGAAVIKYI IENKN
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