| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0840 |
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| Symbol | |
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| ID | 8251929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 991477 |
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| End bp | 992361 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644934490 |
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| Product | integrase family protein |
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| Protein accession | YP_003091124 |
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| Protein GI | 255530752 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.774041 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGTTG AGCATTTTCT GACCTACCTT CAGCACGAGA AGAGATATTC TTCACATACC
ATCCAGTCTT ATCAAACAGA TCTGCTACAG TTTACTGATT TTATGCAGCA AACTTTTGAA
CTGCCCTTAA CTGAGGTGAA GTATGTGCAT ATAAGAAATT TTATTGTTGC ACTGATGGAA
GATGAAATTT CTGAGAATTC TGTGGGCCGG AAGCTATCTG CCCTACGCAG TTTTTATAAG
TATCTGTTGC GCGAAAATGT ATTGTCCTCA AATCCAATGG CGCTTGTTAA GGCACCAAAG
GTACCTAAGA GATTACCTGT ATTTGTGGAT GAAGGTAAAC TTGACCTGCT GCTGGATTCA
GAAGAATTTT TTGATGGTAG CTTTCCTTCA CTGCGCGATA AAACGGTTAT AGAAACTTTA
TTTGGTACCG GGATCCGTTT GGCCGAACTG CTCTCGTTAA AGGAAACAGA TATTAATTTT
TATGAATCTA CGATCAGAGT GATGGGGAAA AGAAGTAAAG AGAGGATCGT TCCAATAGGT
AAAACGCTTA GGGAACAGTT CAGGGTTTAC ATGGAACTTA AAACATTACA AAATTTTGAT
AACAAAACGA CCATGTTATT CGTTACTGAT AAAGGAGCTG CTGCTTACCC TAAACTGATA
TACAGAACTG TGCAGCGTTA TTTGACTTAT GTTTCGACAC AAGATAAAAA AAGTCCCCAC
GTGTTGCGCC ATTCTTATGC CACTAGTTTA TTGAACAGAG GGGCCGATTT GAATGCCATT
AAAGAATTAT TGGGACATGC AAGCTTAGCG GCAACGCAGG TTTATACGCA CAATTCAGTA
GAAAGATTAA AAACAATATA TAAACAGGCC CATCCAAAGG CGTAA
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| Protein sequence | MTVEHFLTYL QHEKRYSSHT IQSYQTDLLQ FTDFMQQTFE LPLTEVKYVH IRNFIVALME
DEISENSVGR KLSALRSFYK YLLRENVLSS NPMALVKAPK VPKRLPVFVD EGKLDLLLDS
EEFFDGSFPS LRDKTVIETL FGTGIRLAEL LSLKETDINF YESTIRVMGK RSKERIVPIG
KTLREQFRVY MELKTLQNFD NKTTMLFVTD KGAAAYPKLI YRTVQRYLTY VSTQDKKSPH
VLRHSYATSL LNRGADLNAI KELLGHASLA ATQVYTHNSV ERLKTIYKQA HPKA
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