Gene Phep_0739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0739 
Symbol 
ID8251827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp863168 
End bp863527 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content42% 
IMG OID644934388 
Productribosomal protein S6 
Protein accessionYP_003091023 
Protein GI255530651 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0360] Ribosomal protein S6 
TIGRFAM ID[TIGR00166] ribosomal protein S6 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0945845 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAGT ACGAAACTGT TATCGTTCTA ACCCCGTTGT TGTCAGAAGA AGTTGCGAAA 
GAGGCGATTG CCAAATTCAG CAAGATCATC GCTGACAGCG GAGCCGAAAT TGTTCAAGAG
GACAATTGGG GTTTGAGAAA ATTAGCGTAT CCGATTGAAA AAAAAGCAAG CGGATTTTTC
CACCTTACAG AGTACAAATC TTCAGGTGAA TTAATTAACA AGTTGGAGTT GGAGCTTAAG
CGCGATGAGC GTGTGCTACG TTTCCTTACC ATTAGATTAG ACCGTCATGC GGTTGCCTAT
AATGAGAAGA AACGCAGTGG TGCTTTTAAC AAAAAACCTA AACAGGAGGC TGCAGTATAA
 
Protein sequence
MNQYETVIVL TPLLSEEVAK EAIAKFSKII ADSGAEIVQE DNWGLRKLAY PIEKKASGFF 
HLTEYKSSGE LINKLELELK RDERVLRFLT IRLDRHAVAY NEKKRSGAFN KKPKQEAAV