Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0736 |
Symbol | |
ID | 8251824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 859475 |
End bp | 861283 |
Gene Length | 1809 bp |
Protein Length | 602 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644934385 |
Product | DNA polymerase III, subunits gamma and tau |
Protein accession | YP_003091020 |
Protein GI | 255530648 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
TIGRFAM ID | [TIGR02397] DNA polymerase III, subunit gamma and tau |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.536606 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGAATT TTATAGTATC AGCCCGTAAG TACCGTCCGG CAACGTTTGA AACCGTTGTT GGCCAGCAGC ACATTACCGG CACTTTAAAA AACGCCATTA AAAACAACCA GCTGGCACAG GCTTTTTTAT TTTGCGGACC CAGGGGAGTA GGTAAAACAA CCTGCGCACG TATCCTTGCC AAAACCATCA ACTGTACCAG CTTAACCGCC GAACAGGAAG CCTGCGGCAC CTGTGAGTCC TGCGTTTCCT TTCAAACCGG CCATTCCTTT AACTTTCACG AGCTTGATGC GGCTTCTAAT AACTCGGTCG ACGACATCAG GAGCCTGATC GAACAGGTCC GAATCCCGCC GCAGGCAGGA AAATATAAAA TCTATATCAT AGATGAGGTG CACATGCTTT CGGCAAATGC CTTCAATGCC TTCCTGAAAA CACTGGAAGA ACCACCTTCC TATGCCATAT TTATATTGGC TACCACCGAA AAGCACAAAA TACTGCCCAC CATATTGTCG CGCTGCCAGA TCTTTGATTT CAACCGCATC CAGGTAGAGG ACATATCAGG CCATTTAAAT AAAATTGCAC AGCGCGAAAA CATAGCCGTA GAGGCTGATG GGCTCCACAT TATTGCCCAA AAGGCAGATG GTGGCTTAAG GGATGCACTT TCCATGTTCG ACCAGATTGT AAGTTACACC AATAAGAACT TAACTTATAA ATCGGTAATC GACAACCTCA ACATCCTCGA CTACGACTAC TATTTTAAGC TTACCCAACA CCTTACGGCT ACAGATGTAA GCCATACACT CATCCTCTTT GATGAAATCC TGAACAATGG TTTTGATGGC AATAACTTCA TCAACGGATT GGCCAGCCAC CTCAGAAACC TGCTTGTTGC CAAAGACCCG CAAACCACCA AACTGCTGGA AGTAAGCGAG AACATCAAAC AAAAATACAT TAGCCAAAGC CAGCAAACGC CGGTTTCATT TATTCTGACG GCCTTAAACC TGGCTAACCA GTGCGATCTG AACTACAAAA ACAGTAAAAA CCAGCGGCTC CAGGTAGAGA TGGCCCTGAT CAAGATGTGC CACATCCCAT CGGTACTCCA ATTAGCCAGC CAACCCTTAA CCAATACCGC GACTGACCCA GATCAGATTA AAAAAAAAAC TAGTATAAGT ACTGAACAAT CCTCATTTAC AGCTCCGGCC ACTTCGGTAG CCGAAAGTCC AGTCCCTGTA AATCTACCCC CTGTTATACC CGCTGAAGTT AACCCGACAG TCAATATACC TAAAAAAACG CCCCCACCAT CTTCCAAAAT TGTATTAAAC CCAATATCCC TGGCACAGCA AAGTAAGGTT GCCATGCTTG TACCTTCATT AAACGGCATC CAGAACAACG CAGAAGGAGC AGATGGCGAT GAACCTAAAT ACATCACCGG AAGTGATAAA GAAATTTTCA CACAGGACCA GTTGCTGCTT TACTGGAACC AATACACCAG TATGGTGAAA GAAGCCAACA GGATCAATGT ATATACCCTG ATGAGTACCT CAGTTCCCAT CCTCGAAAAA CCGGATGAAA TCCTGGTACA GGTAGAACAC AAACTACAGG AAGACCTGCT TCAGGAAGAA ATGATAGACC TGCTCAATTT TTTGAGGCCA AGGCTTAAAA ACTTCAGCAT CTATATCAAA ACCAAACAAG TGGTAAAAGA AGTGGTAAAC CGTCTATATA CCAGCACCGA AAAATACCAG TACCTGGTAG AAAAAAATCC AAAGCTGGAA GAAATGCGCA GAAGGTTCAA CCTCGATGTA AACCCTTAA
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Protein sequence | MENFIVSARK YRPATFETVV GQQHITGTLK NAIKNNQLAQ AFLFCGPRGV GKTTCARILA KTINCTSLTA EQEACGTCES CVSFQTGHSF NFHELDAASN NSVDDIRSLI EQVRIPPQAG KYKIYIIDEV HMLSANAFNA FLKTLEEPPS YAIFILATTE KHKILPTILS RCQIFDFNRI QVEDISGHLN KIAQRENIAV EADGLHIIAQ KADGGLRDAL SMFDQIVSYT NKNLTYKSVI DNLNILDYDY YFKLTQHLTA TDVSHTLILF DEILNNGFDG NNFINGLASH LRNLLVAKDP QTTKLLEVSE NIKQKYISQS QQTPVSFILT ALNLANQCDL NYKNSKNQRL QVEMALIKMC HIPSVLQLAS QPLTNTATDP DQIKKKTSIS TEQSSFTAPA TSVAESPVPV NLPPVIPAEV NPTVNIPKKT PPPSSKIVLN PISLAQQSKV AMLVPSLNGI QNNAEGADGD EPKYITGSDK EIFTQDQLLL YWNQYTSMVK EANRINVYTL MSTSVPILEK PDEILVQVEH KLQEDLLQEE MIDLLNFLRP RLKNFSIYIK TKQVVKEVVN RLYTSTEKYQ YLVEKNPKLE EMRRRFNLDV NP
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