| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0723 |
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| Symbol | |
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| ID | 8251811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 837162 |
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| End bp | 837749 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644934372 |
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| Product | RNA polymerase sigma factor, sigma-70 family |
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| Protein accession | YP_003091007 |
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| Protein GI | 255530635 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTGAGT ATCACAAACT CAATGATAAC GAACTGACCG ACCTGGTCAG AAAAAGTGAT
GAACTGGCAT TTGCCGAAAT TTACCAGCGT TACTGGACCA TCATGTACAT GCATGCCCTT
AAAATGCTGA AAAATGAAGA AGATGCCAGA GATGTGATAC AGGAATTATT TACAACACTA
TGGAGCAAAT GCCAAAGCCT CACTTCCAGC ATTAACCTTT CAGGCTACCT TTATACCATT
GTCAGAAATA AAGTGCTGGA CCTGATTGAA CAAAAAAAAA CAAGAAGTAT CCACCTGGAA
TCTTTGGCAC TTTATCTGGA AGAACACCAC AATAAAACAC TGGAAGACCT TACAGAAAGA
GAAATGATGC AGGCACTTGA CCATGAGATC GGTCAGTTGC CCGGTAAAAT GAGGGTGATC
TTTCAGATGC GTGTAAAAGA ACATAAAACT TATAAAGAAA TTGCTGAAGC GCTTGAAATA
TCAGATAAAA CGGTGAAAAA GCAGGTCAGC AATGCCATTA AGCTCATTAA ACCTAAATTA
AGCGGCTTTA CAGGCTGGCC CCTGCTGCTC TATTTTTTAA GCAGGTAA
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| Protein sequence | MLEYHKLNDN ELTDLVRKSD ELAFAEIYQR YWTIMYMHAL KMLKNEEDAR DVIQELFTTL
WSKCQSLTSS INLSGYLYTI VRNKVLDLIE QKKTRSIHLE SLALYLEEHH NKTLEDLTER
EMMQALDHEI GQLPGKMRVI FQMRVKEHKT YKEIAEALEI SDKTVKKQVS NAIKLIKPKL
SGFTGWPLLL YFLSR
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