| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0707 |
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| Symbol | |
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| ID | 8251795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 815192 |
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| End bp | 815878 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644934356 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_003090991 |
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| Protein GI | 255530619 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.265923 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGTAA CTGATAAAGA TGTATTGTAT GAGGATAATC ACCTGATTGC AGTATGTAAA
AAGGCGGGGG ATATTGTACA GATTGACGAA ACGGGGGATG AGCCTTTGGA TGAGCAGGTA
AAAAAATACC TGGCGATAAA ATACAATAAA CCCAATAGTG CTTTTCTGGG TGTGGTACAC
CGGCTGGACC GGCCCGTTAG CGGCGTAATT TTATTTGCTA AAACCAGCAA GGCCCTGGAA
AGGATGAATG CCATTTTTAA AAACCGGGAA GTAAAAAAGA CCTACTGGGC CATAGTACGT
AAAAAGCCGG TAAAAACATC GGGTACCCTG ATCCACTGGC TGATCAAAAA CCCTCAGAAG
AATGTGGTCA CTGCTTATGC CGAAGAAGTT CCGGGCAGCC AGCGTTGTGA ATTGAGCTAC
CGGTTAATCG GAACTTTAAA CGATTATTAT TTAATTGAGG TAGACCCGCT TACGGGGCGT
TCGCACCAGA TTAGGGTCCA GTTGTCTACC ATGGGCTGTC CTATTGTAGG CGACAACAAA
TATGGTTATC CCAGGGGAAG CCGCAAAGGC AGTATCTGCC TGCATGCACG ACGGCTGCAG
TTTATTCACC CTGTAAAAAA GGAGCCGGTA AATATATTTG CCGAATTGCC TGTTGATGGC
TTCTGGGAAA AGTTTGAGGG ATTTTAA
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| Protein sequence | MPVTDKDVLY EDNHLIAVCK KAGDIVQIDE TGDEPLDEQV KKYLAIKYNK PNSAFLGVVH
RLDRPVSGVI LFAKTSKALE RMNAIFKNRE VKKTYWAIVR KKPVKTSGTL IHWLIKNPQK
NVVTAYAEEV PGSQRCELSY RLIGTLNDYY LIEVDPLTGR SHQIRVQLST MGCPIVGDNK
YGYPRGSRKG SICLHARRLQ FIHPVKKEPV NIFAELPVDG FWEKFEGF
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